LOCUS AK295543 1547 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59533 complete cds.
ACCESSION AK295543
VERSION AK295543.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1547)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1547
/clone="BRHIP2018024"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490167"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 154..1119
/codon_start=1
/protein_id="BAH12100.1"
/transl_table=1
/translation="MAQAVWSRLGRILWLACLLPWAPAGVAAEFLVGDLVVTQNTSLP
WPSSYLTKTVLKVSFLLHDPSNFLKTALFLYSWDFGDGTQMVTEDSVVYYNYSIIGTF
TVKLKVVAEWEEVEPDATRAVKQKTGDFSASLKLQETLRGIQVLGPTLIQTFQKMTVT
LNFLGSPPLTVCWRLKPECLPLEEGECHPVSVASTAYNLTHTFRDPGDYCFSIRAENI
ISKTHQYHKIQVWPSRIQPAVFAFPCATLITVMLAFIMYMTLRNATQQKDMVENPEPP
SGVRCCCQMCCGPFLLETPSEYLEIVRENHGLLPPLYKSVKTYTV"
BASE COUNT 287 a 525 c 404 g 331 t
ORIGIN
1 agagcgtccc ccggcgagga cgagcgagca cggcgcccgc acctccccgc accgcccgcg
61 ctgcgcgccc ggaggagcga ccgccgcagt tctcgagctc cagctgcatt ccctccgcgt
121 ccgccccacg cttctcccgc tccgggcccc gcaatggccc aggcagtgtg gtcgcgcctc
181 ggccgcatcc tctggcttgc ctgcctcctg ccctgggccc cggcaggggt ggccgcagag
241 ttcctcgtgg gggaccttgt tgtcacccag aacacttccc taccctggcc cagctcctat
301 ctcactaaga ccgtcctgaa agtctccttc ctcctccacg acccgagcaa cttcctcaag
361 accgccttgt ttctctacag ctgggacttc ggggacggga cccagatggt gactgaagac
421 tccgtggtct attataacta ttccatcatc gggaccttca ccgtgaagct caaagtggtg
481 gcggagtggg aagaggtgga gccggatgcc acgagggctg tgaagcagaa gaccggggac
541 ttctccgcct cgctgaagct gcaggaaacc cttcgaggca tccaagtgtt ggggcccacc
601 ctaattcaga ccttccaaaa gatgaccgtg accttgaact tcctggggag ccctcctctg
661 actgtgtgct ggcgtctcaa gcctgagtgc ctcccgctgg aggaagggga gtgccaccct
721 gtgtccgtgg ccagcacagc gtacaacctg acccacacct tcagggaccc tggggactac
781 tgcttcagca tccgggccga gaatatcatc agcaagacac atcagtacca caagatccag
841 gtgtggccct ccagaatcca gccggctgtc tttgctttcc catgtgctac acttatcact
901 gtgatgttgg ccttcatcat gtacatgacc ctgcggaatg ccactcagca aaaggacatg
961 gtggagaacc cggagccacc ctctggggtc aggtgctgct gccagatgtg ctgtgggcct
1021 ttcttgctgg agactccatc tgagtacctg gaaattgttc gtgagaacca cgggctgctc
1081 ccgcccctct ataagtctgt caaaacttac accgtgtgag cactccccct ccccacccca
1141 tctcagtgtt aactgactgc tgacttggag tttccagcag ggtggtgtgc accactgacc
1201 aggaggggtt catttgcgtg gggctgttgg cctggatcat ccatccatct gtacagttca
1261 gccactgcca caagcccctc cctctctgtc acccctgacc ccagccattc acccatctgt
1321 acagtccagc cactgacata agccccactc ggttaccacc cccttgaccc cctacctttg
1381 aagaggcttc gtgcaggact ttgatgcttg gggtgttccg tgttgactcc caggtgggcc
1441 tggctgccca ctgcccattc ctctcatatt ggcacatctg ctgtccattg ggggttctca
1501 gtttcctccc ccagacagcc ctacctgtgc cagagagcta gaaagaa
//