LOCUS AK295530 2262 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58184 complete cds, highly similar to Homo
sapiens RAN binding protein 10 (RANBP10), mRNA.
ACCESSION AK295530
VERSION AK295530.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2262)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2262
/clone="BRHIP2014763"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490154"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 264..1865
/codon_start=1
/note="highly similar to Homo sapiens RAN binding protein
10 (RANBP10), mRNA"
/protein_id="BAG58442.1"
/transl_table=1
/translation="MGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGP
TFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQ
QPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAF
ARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCR
QFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGV
ASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS
NPWLQLERRPNQAAPTTPPGPTPTSTPPHSDSEMEMEAEHYPNGVLGSMSTRIVNGAY
KHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTE
MLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQA
SECLRLMARAGLGSCSFARVDDYLH"
BASE COUNT 477 a 723 c 595 g 467 t
ORIGIN
1 gacacaatag tagctccctc caagatggcg gcagcgacgg cagacccggg agctgggaac
61 ccgcagcctg gggactcctc cggcgggggc gctgggggcg ggctgccgtc ccctggggag
121 caggagctga gccggcgctt gcagcgcctg tatcccgcgg tcaaccagca agagactccg
181 ctgccgcgct cctggagccc caaggacaaa tacaactaca ttggtctctc ccagggcaac
241 ctccgcgtcc actacaaagt tacatgggaa taggactctc ggctcaaggc gtcaacatga
301 acagacttcc tggttgggac aaacattcct atggttacca tggtgatgat gggcattcgt
361 tctgctcctc ggggactggc cagccctatg gtcccacatt caccacagga gacgtgatcg
421 gctgctgtgt caacctcatc aatggcacct gcttctacac caagaatggc cacagccttg
481 gtatagcctt cacagacctc ccggccaacc tctaccccac cgtaggcctg cagacacctg
541 gggagattgt ggacgccaac tttgggcagc agcccttcct gtttgacatt gaggactaca
601 tgcgggagtg gcgtgccaag gtccagggca cggtccactg cttccccatc agtgcccggc
661 ttggcgagtg gcaggcagtg ctgcagaaca tggtttcatc ttacctcgtg catcatgggt
721 attgtgccac agccacggct tttgctcgaa tgactgaaac cccgattcag gaagaacagg
781 cgtccataaa gaacagacaa aagatccaga agctggtgct ggagggccgt gtgggcgagg
841 ccatcgagac cacccagcgc ttctacccag ggctgctgga gcacaacccc aacctcctct
901 tcatgctcaa gtgccggcag tttgtggaga tggtgaatgg gacggacagt gaggtccgaa
961 gtttgagctc ccgaagcccc aagtcccagg acagctaccc tggctccccc agcctcagtc
1021 cccgacatgg ccccagtagt tcccacatgc acaacacagg agcagacagt cccagctgta
1081 gcaatggcgt cgcgtccacc aagagcaaac agaaccacag taaataccct gcacccagct
1141 cctcatcctc gtcctcctcc tcctcctcgt cctcttcccc atcctccgtc aattactccg
1201 agtccaactc aacagactcc accaagtccc agcaccacag cagtaccagt aaccaggaga
1261 ccagcaaccc atggctacag cttgaaagga ggcccaacca ggctgctcca accacacccc
1321 ctgggccaac tcccacctca acccctcccc acagcgacag tgagatggag atggaggcag
1381 agcactaccc caacggtgtg ctaggaagca tgtccacacg cattgttaat ggtgcctaca
1441 agcatgagga cctgcagacg gatgagtcca gcatggatga caggcatcct cggcggcagc
1501 tctgcggggg caaccaggct gccacagaaa ggatcattct gtttggccgc gagttgcagg
1561 cattgagtga gcagttgggc cgggagtacg gcaagaattt ggcccacaca gagatgctgc
1621 aggatgcctt cagcctgctg gcatactcag acccctggag ctgcccagtt ggccagcagc
1681 ttgaccccat ccagagggaa cctgtgtgtg ctgccctcaa cagcgccatt ttagagtccc
1741 agaacctgcc aaagcagccc cctctgatgc tcgccctggg ccaggcatct gagtgtctcc
1801 ggctcatggc ccgagcaggc ctgggttctt gctcctttgc cagagttgat gactacttgc
1861 actagctgac tgtgctggct ggctctggct ggccctccac tggccccagg gctggagctg
1921 ccctgccctc cataggcaac tggtgcaggg actgggaaac catagacaga gtccactcct
1981 cctgcctggc ctttccccct ctccctttcc ttccttcctt cctttctctg cccaccaccc
2041 cgctcagtct ctctctctct ccccttcacg tgcagcggcc tgtaacacag tattggctgg
2101 ttactctcat gtagcgcctt ctattttgaa aggggggttt tgttttgagg aggggttggg
2161 gtttttaaat ttttttctcc tgactgagcc accagtattt atctctggag agtttgtgct
2221 gagctggttt ctgctaattt agtgatgaag cctatccaag tt
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