LOCUS AK295529 2192 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54353 complete cds, highly similar to
Vacuolar protein sorting-associated protein 45.
ACCESSION AK295529
VERSION AK295529.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2192)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2192
/clone="BRHIP2014492"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490153"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 174..1778
/codon_start=1
/note="highly similar to Vacuolar protein
sorting-associated protein 45"
/protein_id="BAH12096.1"
/transl_table=1
/translation="MVYTQSEILQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVD
YIIQELRRPKYTIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFS
LNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSEAAKRLAECVKQVIT
KEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPG
ISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMK
AFVESYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSSALQNI
KRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVE
YGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENL
YPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKSFL
EEVLASGLHSRSKESSQVTSRSASRR"
BASE COUNT 641 a 455 c 509 g 587 t
ORIGIN
1 aaaagggggc gggaagggct gtagggtact tgtcaattcg ccgccatgaa cgtggttttt
61 gctgtgaagc agtacatttc caaaatgata gaggacagcg ggcctggtat gaaagtactt
121 ctcatggata aagagacgtt aatcttttgt ttttacagac tggcatagtg agtatggtat
181 acacacaatc ggagattcta cagaaggaag tgtacctctt tgaacgcatt gattctcaaa
241 atcgagagat catgaaacac ctgaaggcaa tttgttttct tcgacctaca aaggagaatg
301 tggattatat tattcaggag ctccgaagac ccaaatacac tatatatttc atttatttca
361 gtaatgtgat cagcaagagt gacgtgaagt cattggctga agctgatgaa caggaagttg
421 tggctgaggt tcaggaattt tatggtgatt acattgctgt gaacccacat ttgttttccc
481 tcaatatttt gggttgctgc cagggtcgaa attgggatcc agcccagcta tctagaacaa
541 ctcaagggct tacagctctc cttttatctc tgaagaagtg tcccatgatt cgttatcagc
601 tctcatcaga ggcagcaaag agacttgcag agtgcgttaa gcaagtgata actaaagaat
661 atgaactgtt tgaattccgt cggacagagg ttcctccatt gctccttatt ttagatcgct
721 gtgatgatgc catcacccca ttgctaaacc agtggacata tcaggccatg gtccacgaac
781 tactaggcat aaacaacaat cggattgatc tttccagagt gccgggaatc agtaaagact
841 taagagaagt ggtcctatct gctgaaaatg atgaattcta tgctaataat atgtacctga
901 actttgctga gattggtagc aatataaaga atctcatgga agattttcag aagaagaaac
961 caaaagaaca gcaaaaacta gaatcaatag cagacatgaa ggcgtttgtt gagagttatc
1021 cacagttcaa gaaaatgtct gggactgttt caaagcatgt gacagtggtt ggagaactgt
1081 ctcgattggt cagtgaacgg aatctgctgg aggtttcaga ggttgagcaa gaactggcct
1141 gtcaaaatga ccattctagt gctctccaga atataaaaag gcttctgcag aaccccaaag
1201 tgacagagtt tgatgctgcc cgcctggtga tgctttatgc tttacattat gagcgacaca
1261 gcagcaatag cctgccagga ctaatgatgg acctcaggaa taaaggtgtt tctgagaagt
1321 atcgaaagct cgtgtctgca gttgttgaat atggtggtaa acgagtcaga ggaagtgacc
1381 tcttcagccc caaagatgct gtggctatca ccaaacaatt cctcaaagga ctgaagggag
1441 tagaaaatgt atatacacag catcaacctt tcctacatga aaccctggat catctcatca
1501 aaggaaggct taaggaaaac ctatatcctt atttaggccc cagcacactc agagacagac
1561 ctcaggatat cattgtgttt gtaattggag gagccaccta tgaagaggct ctaacagttt
1621 ataacctgaa ccgcaccact cctggagtga ggattgtcct gggaggcacc acagtgcaca
1681 acacgaaaag tttcctagag gaagttctgg cttctggact gcacagccga agcaaggaga
1741 gctctcaagt cacatcaagg tcagcgagca gaagatgaaa cggtggttgg gggaagggca
1801 cagcttcctc tcttgtcccc actacaggtt ttccctacta aacaaaggtg ttggagagca
1861 gctttgggtt ctgtgctggt tgttagaact catctccagg tagcccacgg atacgtggtt
1921 ggcacagaca caagactccc agagttgtcc taacaataag tctgagccca tctcaaccca
1981 cttttctccg gtagtcttta tgtatctgtt agcacaatca cttcagttac tgatgaattt
2041 tgttgggatc tgacttgggg aaagggttat cagagcctag aggggcttaa aaagtaatca
2101 tttgatgtac ataccacact ccttggcttc ctttctcttc ccttaaccct ttctgctttt
2161 cattaaccac attcctgcac aactcatttc tg
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