LOCUS AK295504 2106 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56084 complete cds, highly similar to
Serine/threonine-protein phosphatase withEF-hands 1 (EC 3.1.3.16).
ACCESSION AK295504
VERSION AK295504.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2106
/clone="BRHIP2009723"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490128"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 140..1933
/codon_start=1
/note="highly similar to Serine/threonine-protein
phosphatase withEF-hands 1 (EC 3.1.3.16)"
/protein_id="BAH12089.1"
/transl_table=1
/translation="MQLSTFFSFMLENYTHIHKEELELRNQSLESEQDMRDRWDYVDS
IDVPDSYNGPRLQFPLTCTDIDLLLEAFKEQQILHAHYVLEVLFETKKVLKQMPNFTH
IQTSPSKEVTICGDLHGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRGKNSIEILMIL
CVSFLVYPNDLHLNRGNHEDFMMNLRYGFTKEILHKYKLHGKRILQILEEFYAWLPIG
TIVDNEILVIHGGISETTDLNLLHRVERNKMKSVLIPPTETNRDHDTDSKHNKVGVTF
NAHGRIKTNGSPTEHLTEHEWEQIIDILWSDPRGKNGCFPNTCRGGGCYFGPDVTSKI
LNKYQLKMLIRSHECKPEGYEICHDGKVVTIFSASNYYEEGSNRGAYIKLCSGTTPRF
FQYQVTKATCFQPLRQRVDTMENSAIKILRERVISRKSDLTRAFQLQDHRKSGKLSVS
QWAFCMENILGLNLPWRSLSSNLVNIDQNGNVEYMSSFQNIRIEKPVQEAHSTLVETL
YRYRSDLEIIFNAIDTDHSGLISVEEFRAMWKLFSSHYNVHIDDSQVNKLANIMDLNK
DGSIDFNEFLKAFYVVHRYEDLMKPDVTNLG"
BASE COUNT 668 a 441 c 435 g 562 t
ORIGIN
1 attctgtggg tctgcagcac tgagagctgc gttgatcatc cagaactggt accgaggtta
61 caaagctcga ctgaaggcca gacaacacta tgccctcacc atcttccagt ccatcgaata
121 tgctgatgaa caaggccaaa tgcagttatc caccttcttt tccttcatgt tggaaaacta
181 cacacatata cataaggaag agctagaatt aagaaatcag tctcttgaaa gcgaacagga
241 catgagggat agatgggatt atgtggactc gatagatgtc ccagactcct ataatggtcc
301 tcggctacaa tttcctctca cttgtacgga tattgattta cttcttgagg ccttcaagga
361 acaacagata cttcatgccc attatgtctt agaggtgcta tttgaaacca agaaagtcct
421 gaagcaaatg ccgaatttca ctcacataca aacttctccc tccaaagagg taacaatctg
481 tggtgatttg catgggaaac tggatgatct ttttttgatc ttctacaaga atggtctccc
541 ctcagagagg aacccgtatg tttttaatgg tgactttgta gatcgaggaa agaattccat
601 agagatccta atgatcctgt gtgtgagttt tcttgtctac cccaatgacc tgcacttgaa
661 cagagggaac cacgaagatt ttatgatgaa tctgaggtat ggcttcacga aagaaatttt
721 gcataaatat aagctacatg gaaaaagaat cttacaaatc ttggaagaat tctatgcctg
781 gctcccaatc ggtacaatcg ttgacaatga aatcctggtc atccatggtg ggatatcaga
841 gaccacagac ttgaatttac tccaccgtgt agagaggaac aagatgaaat ctgtgctgat
901 accaccaacg gaaacaaaca gagaccatga cactgactcg aagcacaata aagtaggtgt
961 gacttttaat gcacatggaa gaatcaaaac aaatggatct cctactgaac acttaacaga
1021 gcatgaatgg gaacagatta ttgatattct gtggagtgat cccagaggca aaaatggctg
1081 ttttccaaat acgtgccgag gagggggctg ctattttgga ccagatgtta cttccaagat
1141 tcttaataaa taccagttga agatgctcat caggtctcat gaatgtaagc ccgaagggta
1201 tgaaatctgt catgatggga aggtggtgac tatattttct gcttctaatt attatgaaga
1261 aggcagcaat cgaggagctt acatcaaact atgttctggt acaactcctc gatttttcca
1321 gtaccaagta actaaagcaa cgtgctttca gcctcttcgc caaagagtgg atactatgga
1381 aaacagcgcc atcaagatat taagagagag agtgatttca cgaaaaagtg accttactcg
1441 tgctttccaa cttcaagacc acagaaaatc aggaaaactt tctgtgagcc agtgggcttt
1501 ttgcatggag aacattttgg ggctgaactt accatggaga tccctcagtt cgaatctggt
1561 aaacatagac caaaatggaa acgttgaata catgtccagc ttccagaata tccgcattga
1621 aaaacctgta caagaggctc attctactct agttgaaact ctgtacagat acagatctga
1681 cctggaaatc atatttaatg ccattgacac tgatcactca ggcctgatct ccgtggaaga
1741 atttcgtgcc atgtggaaac tttttagttc tcactacaat gttcacattg atgattccca
1801 agtcaataag cttgccaaca taatggactt gaacaaagat ggaagcattg actttaatga
1861 gtttttaaag gctttctatg tagtgcatag atatgaagac ttgatgaaac ctgatgtcac
1921 caaccttggc taaacacaaa tgagagcttc cctcaggctc cctgaaacag ctaggcccaa
1981 atcacaagta cagtcctttc caacacccct gaaattcata gtcagtagca gagaaaagca
2041 gatcccaatt catcccacaa acagatgcat agtatgggtt ttggaagtcc ctagcaagct
2101 gttatt
//