LOCUS AK295493 2269 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53997 complete cds, highly similar to Alpha-2
catenin.
ACCESSION AK295493
VERSION AK295493.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2269)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2269
/clone="BRHIP2007788"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490117"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 255..1868
/codon_start=1
/note="highly similar to Alpha-2 catenin"
/protein_id="BAH12088.1"
/transl_table=1
/translation="MTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEK
EVKEYAQVFREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLA
ARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIAL
QEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFA
EQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQ
EDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVA
KWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLAR
AVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLI
QAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEE
FQTRVRRGSQKKHISPVQALSEFKAMDSF"
BASE COUNT 663 a 458 c 605 g 543 t
ORIGIN
1 aaaaaagcaa cttgagagaa gacacaggaa ggcaatgatt tggggcttgg ctaagatttt
61 tggggttttt tccccctctt gcgggtactg gaattctgca gtcagccagc ccttttttga
121 ggtggagagg ggaaatgctt tccaaaccca cctagtttgg gaagccatcc aagtcccggt
181 ggtgtgagat ccagtgtggc aaaaagactg gaaggaaaga aaaaggagat cctctcaaca
241 ttgcgattga taagatgact aagaaaacaa gagatctaag gagacagctt cggaaagcag
301 tgatggatca catatctgac tctttcctgg aaaccaatgt tcctttgcta gttctcattg
361 aggctgcaaa gagcggaaat gaaaaggaag tgaaagaata tgcccaagtt ttccgtgagc
421 atgccaacaa actggtagag gttgccaatt tggcctgttc catctccaac aatgaagaag
481 gggtgaaatt agttcggatg gcagccaccc agattgacag cctgtgtccc caggtcatca
541 atgccgctct gacactggct gcccggccac agagcaaagt tgctcaggat aacatggacg
601 tcttcaaaga ccagtgggag aagcaggtcc gagtgttgac agaggccgtg gatgacatca
661 cctcagtgga tgacttcctc tctgtctcag aaaatcacat cttggaggat gtgaacaagt
721 gtgtgatagc cctccaagag ggcgatgtgg acactctgga ccggactgca ggggccatca
781 ggggccgggc agctcgagtc atacacatca tcaatgctga gatggagaac tatgaagctg
841 gggtttatac tgagaaggtg ttggaagcta caaaattgct ttctgaaaca gtgatgccac
901 gcttcgctga acaagtagag gttgccattg aagccctgag tgccaacgtt cctcaaccgt
961 ttgaggagaa tgagttcatc gatgcctctc gcctggtgta tgatggcgtt cgggacatca
1021 gaaaggctgt gctgatgatc aggaccccag aagaactaga ggatgattct gactttgagc
1081 aggaagatta tgatgtgcgt agcaggacaa gtgttcagac tgaggatgac cagctcattg
1141 cagggcagag cgcacgggcc atcatggcgc aactaccgca ggaggagaag gcaaaaatag
1201 ctgagcaggt ggagatattc catcaagaga aaagcaagct ggatgcagaa gtggccaaat
1261 gggacgacag cggcaatgat atcattgtac tggccaagca gatgtgtatg atcatgatgg
1321 aaatgacaga cttcacaaga ggcaaaggcc cattgaaaaa tacatctgat gtcattaatg
1381 ctgccaagaa aattgccgaa gcaggttctc gaatggacaa attagctcgt gctgtggctg
1441 atcagtgtcc tgattcagca tgtaagcagg atttattagc ctaccttcaa cgaattgcct
1501 tgtattgcca tcagcttaat atctgcagca aggtgaaggc agaagtgcag aatctgggag
1561 gagagctcat tgtgtcaggg ctggacagtg ccacatcgct tatccaggca gctaaaaacc
1621 tgatgaatgc tgttgtcctc acggtgaaag catcctatgt ggcctcaacc aaataccaga
1681 aggtctatgg gacagcagct gtcaactcac ctgttgtgtc ttggaagatg aaggctccag
1741 agaagaagcc ccttgtgaag agagaaaagc ctgaagaatt ccagacacga gttcgacgag
1801 gttctcagaa gaaacacatt tcgcctgtac aggctttaag tgaattcaaa gcaatggatt
1861 ccttctagga cgataggttt taacaagaaa gctttttctt tcttttcttt ctttcttttt
1921 ctttttaatt ccatttttgt atgcatacct gccagctcgt atgcctctgg catggggaaa
1981 ttaagggaac agtgtctgtt tgcatgtaag atgagatgag atcaatacta ctgatccatc
2041 tgtagcctgg gaaggagaca ggacattcct gtactaaggt ggcacagagc tgtcctttgc
2101 aacattctca taaaattggg cacagagttc gcattggcgc aatatttatg ggagtgggag
2161 ggatggggaa aataaactta actctacaaa agcaaactct aatgcatgca agaatcatta
2221 ggttggcagg tatatgcata agtgaaaaat ctggaagtgt aatggtaga
//