LOCUS AK295491 1664 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54682 complete cds, highly similar to
Osteopontin precursor.
ACCESSION AK295491
VERSION AK295491.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1664)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1664
/clone="BRHIP2007083"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490115"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 251..1234
/codon_start=1
/note="highly similar to Osteopontin precursor"
/protein_id="BAH12087.1"
/transl_table=1
/translation="MGIVPRSLDKKAHRVQFQLNRIKAKIELPWGSLQLDCLMKTLKE
LYNKYPDAVATWLNPDPSQKQNLLAPQNAVSSEETNDFKQETLPSKSNESHDHMDDMD
DEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFT
PVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAI
PVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDS
QELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN"
BASE COUNT 533 a 347 c 350 g 434 t
ORIGIN
1 gcagcaggag gaggcagagc acagcatcgt cgggaccaga ctcgtctcag gccagttgca
61 gccttctcag ccaaacgccg accaaggaaa actcactacc atgagaattg cagtgatttg
121 cttttgcctc ctaggcatca cctgtgccat accagttaaa caggctgatt ctggaagttc
181 tgaggaaaag cagcactaaa gatgtaccta cccctccaca acagatgaaa ctgtgccagc
241 caaacaacaa atgggcattg tccccagaag cttggacaaa aaggcacaca gagttcaatt
301 ccagttgaac agaataaagg ccaaaataga gctgccttgg gggtcactgc aattagactg
361 cttgatgaag acattaaaag aactttacaa caaataccca gatgctgtgg ccacatggct
421 aaaccctgac ccatctcaga agcagaatct cctagcccca cagaatgctg tgtcctctga
481 agaaaccaat gactttaaac aagagaccct tccaagtaag tccaacgaaa gccatgacca
541 catggatgat atggatgatg aagatgatga tgaccatgtg gacagccagg actccattga
601 ctcgaacgac tctgatgatg tagatgacac tgatgattct caccagtctg atgagtctca
661 ccattctgat gaatctgatg aactggtcac tgattttccc acggacctgc cagcaaccga
721 agttttcact ccagttgtcc ccacagtaga cacatatgat ggccgaggtg atagtgtggt
781 ttatggactg aggtcaaaat ctaagaagtt tcgcagacct gacatccagt accctgatgc
841 tacagacgag gacatcacct cacacatgga aagcgaggag ttgaatggtg catacaaggc
901 catccccgtt gcccaggacc tgaacgcgcc ttctgattgg gacagccgtg ggaaggacag
961 ttatgaaacg agtcagctgg atgaccagag tgctgaaacc cacagccaca agcagtccag
1021 attatataag cggaaagcca atgatgagag caatgagcat tccgatgtga ttgatagtca
1081 ggaactttcc aaagtcagcc gtgaattcca cagccatgaa tttcacagcc atgaagatat
1141 gctggttgta gaccccaaaa gtaaggaaga agataaacac ctgaaatttc gtatttctca
1201 tgaattagat agtgcatctt ctgaggtcaa ttaaaaggag aaaaaataca atttctcact
1261 ttgcatttag tcaaaagaaa aaatgcttta tagcaaaatg aaagagaaca tgaaatgctt
1321 ctttctcagt ttattggttg aatgtgtatc tatttgagtc tggaaataac taatgtgttt
1381 gataattagt ttagtttgtg gcttcatgga aactccctgt aaactaaaag cttcagggtt
1441 atgtctatgt tcattctata gaagaaatgc aaactatcac tgtattttaa tatttgttat
1501 tctctcatga atagaaattt atgtagaagc aaacaaaata cttttaccca cttaaaaaga
1561 gaatataaca ttttatgtca ctataatctt ttgtttttta agttagtgta tattttgttg
1621 tgattatctt tttgtggtgt gaataaatct tttatcttga atgt
//