LOCUS AK295470 2663 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54681 complete cds.
ACCESSION AK295470
VERSION AK295470.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2663)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2663
/clone="BRHIP2003884"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490094"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 336..2543
/codon_start=1
/protein_id="BAH12079.1"
/transl_table=1
/translation="MTAGSSYPLFLAAYACTGCLAERLGWFIKSSNEATNITPKHNMK
AFLDELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDVLL
SYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYENVSDIVPPFSAFSPQGMPEGDLV
YVNYARTEDFFKLERDMKINCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPAD
YFAPGVKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPS
IPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKVKMHIHST
NEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKK
EGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVD
CTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEV
FFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRG
GMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNF
TEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSH
NKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSEVA"
BASE COUNT 776 a 525 c 651 g 711 t
ORIGIN
1 agtgcactct agaaacactg ctgtggtgga gaaactggac cccaggtctg gagcgaattc
61 cagcctgcag ggctgataag cgaggcatta gtgagattga gagagacttt accccgccgt
121 ggtggttgga gggcgcgcag tagagcagca gcacaggcgc gggtcccggg aggccggctc
181 tgctcgcgcc gagatgtgga atctccttca cgaaaccgac tcggctgtgg ccaccgcgcg
241 ccgcccgcgc tggctgtgcg ctggggcgct ggtgctggcg ggtggcttct ttctcctcgg
301 cttcctcttc ggttaaaagc caactgcaag gtctaatgac tgcaggatct agctatccat
361 tgtttctggc cgcctatgcg tgcactgggt gtctggcaga gaggctgggg tggtttataa
421 aatcctccaa tgaagctact aacattactc caaagcataa tatgaaagca tttttggatg
481 aattgaaagc tgagaacatc aagaagttct tatataattt tacacagata ccacatttag
541 caggaacaga acaaaacttt cagcttgcaa agcaaattca atcccagtgg aaagaatttg
601 gcctggattc tgttgagcta gcacattatg atgtactgtt gtcctaccca aataagactc
661 atcccaacta catctcaata attaatgaag atggaaatga gattttcaac acatcattat
721 ttgaaccacc tcctccagga tatgaaaatg tttcggatat tgtaccacct ttcagtgctt
781 tctctcctca aggaatgcca gagggcgatc tagtgtatgt taactatgca cgaactgaag
841 acttctttaa attggaacgg gacatgaaaa tcaattgctc tgggaaaatt gtaattgcca
901 gatatgggaa agttttcaga ggaaataagg ttaaaaatgc ccagctggca ggggccaaag
961 gagtcattct ctactccgac cctgctgact actttgctcc tggggtgaag tcctatccag
1021 atggttggaa tcttcctgga ggtggtgtcc agcgtggaaa tatcctaaat ctgaatggtg
1081 caggagaccc tctcacacca ggttacccag caaatgaata tgcttatagg cgtggaattg
1141 cagaggctgt tggtcttcca agtattcctg ttcatccaat tggatactat gatgcacaga
1201 agctcctaga aaaaatgggt ggctcagcac caccagatag cagctggaga ggaagtctca
1261 aagtgcccta caatgttgga cctggcttta ctggaaactt ttctacacaa aaagtcaaga
1321 tgcacatcca ctctaccaat gaagtgacaa gaatttacaa tgtgataggt actctcagag
1381 gagcagtgga accagacaga tatgtcattc tgggaggtca ccgggactca tgggtgtttg
1441 gtggtattga ccctcagagt ggagcagctg ttgttcatga aattgtgagg agctttggaa
1501 cactgaaaaa ggaagggtgg agacctagaa gaacaatttt gtttgcaagc tgggatgcag
1561 aagaatttgg tcttcttggt tctactgagt gggcagagga gaattcaaga ctccttcaag
1621 agcgtggcgt ggcttatatt aatgctgact catctataga aggaaactac actctgagag
1681 ttgattgtac accgctgatg tacagcttgg tacacaacct aacaaaagag ctgaaaagcc
1741 ctgatgaagg ctttgaaggc aaatctcttt atgaaagttg gactaaaaaa agtccttccc
1801 cagagttcag tggcatgccc aggataagca aattgggatc tggaaatgat tttgaggtgt
1861 tcttccaacg acttggaatt gcttcaggca gagcacggta tactaaaaat tgggaaacaa
1921 acaaattcag cggctatcca ctgtatcaca gtgtctatga aacatatgag ttggtggaaa
1981 agttttatga tccaatgttt aaatatcacc tcactgtggc ccaggttcga ggagggatgg
2041 tgtttgagct agccaattcc atagtgctcc cttttgattg tcgagattat gctgtagttt
2101 taagaaagta tgctgacaaa atctacagta tttctatgaa acatccacag gaaatgaaga
2161 catacagtgt atcatttgat tcactttttt ctgcagtaaa gaattttaca gaaattgctt
2221 ccaagttcag tgagagactc caggactttg acaaaagcaa cccaatagta ttaagaatga
2281 tgaatgatca actcatgttt ctggaaagag catttattga tccattaggg ttaccagaca
2341 ggccttttta taggcatgtc atctatgctc caagcagcca caacaagtat gcaggggagt
2401 cattcccagg aatttatgat gctctgtttg atattgaaag caaagtggac ccttccaagg
2461 cctggggaga agtgaagaga cagatttatg ttgcagcctt cacagtgcag gcagctgcag
2521 agactttgag tgaagtagcc taagaggatt ctttagagaa tccgtattga atttgtgtgg
2581 tatgtcactc agaaagaatc gtaatgggta tattgataaa ttttaaaatt ggtatatttg
2641 aaataaagtt gaatattata tat
//