LOCUS AK295450 1351 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61269 complete cds, highly similar to
Bestrophin-1.
ACCESSION AK295450
VERSION AK295450.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1351)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1351
/clone="BRHIP2000929"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000490074"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 104..1231
/codon_start=1
/note="highly similar to Bestrophin-1"
/protein_id="BAH12072.1"
/transl_table=1
/translation="MFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPD
RLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQAGF
MTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQ
CGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTF
LQFFFYVGWLKVGLSRALLGWRHGQRGHGQQLPETRMQCQERKVSRVESSQAWWRTPV
IPATREAEAGESLEPGRRRLWWQSSSSTPLERMMMILRPTGLSTGICRCPCWLWMRCT
RTSLGWSRTCTGISPSHSPPTQLLPPSSVEPPLWAPPSTSA"
BASE COUNT 282 a 396 c 396 g 277 t
ORIGIN
1 agagtcccag ggagtcccac cagcctagtc gccagacctt ctgtgggatc atcggaccca
61 cctggaaccc cacctgctgg ccctcacgga agaacaacag ctgatgtttg agaaactgac
121 tctgtattgc gacagctaca tccagctcat ccccatttcc ttcgtgctgg gcttctacgt
181 gacgctggtc gtgacccgct ggtggaacca gtacgagaac ctgccgtggc ccgaccggct
241 catgagcctg gtgtcgggct tcgtcgaagg caaggacgag caaggccggc tgctgcggcg
301 cacgctcatc cgctacgcca acctgggcaa cgtgctcatc ctgcgcagcg tcagcaccgc
361 agtctacaag cgcttcccca gcgcccagca cctggtgcaa gcaggcttta tgactccggc
421 agaacacaag cagttggaga aactgagcct accacacaac atgttctggg tgccctgggt
481 gtggtttgcc aacctgtcaa tgaaggcgtg gcttggaggt cgaatccggg accctatcct
541 gctccagagc ctgctgaacg agatgaacac cttgcgtact cagtgtggac acctgtatgc
601 ctacgactgg attagtatcc cactggtgta tacacaggtg gtgactgtgg cggtgtacag
661 cttcttcctg acttgtctag ttgggcggca gtttctgaac ccagccaagg cctaccctgg
721 ccatgagctg gacctcgttg tgcccgtctt cacgttcctg cagttcttct tctatgttgg
781 ctggctgaag gtgggcctct ccagggccct gctgggctgg aggcatggcc agaggggtca
841 tggccagcag ctgcctgaga cgaggatgca gtgtcaggaa aggaaggtct cacgggtaga
901 aagcagccag gcgtggtggc gcacacctgt aatcccagct actcgggagg ctgaggcagg
961 agaatcgctt gaacccggga ggcggaggtt gtggtggcag agcagctcat caaccccttt
1021 ggagaggatg atgatgattt tgagaccaac tggattgtcg acaggaattt gcaggtgtcc
1081 ctgttggctg tggatgagat gcaccaggac cagcctcgga tggagccgga catgtactgg
1141 aataagcccg agccacagcc cccctacaca gctgcttccg cccagttccg tcgagcctcc
1201 tttatgggct ccaccttcaa catcagcctg aacaaagagg agatggagtt ccagcccaat
1261 caggaggacg aggaggatgc tcacgctggc atcattggcc gcttcctagg cctgcagtcc
1321 catgatcacc atcctcccag ggcaaactca a
//