LOCUS AK295359 2296 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50524 complete cds, highly similar to DNA
mismatch repair protein Mlh1.
ACCESSION AK295359
VERSION AK295359.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2296)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2296
/clone="BRCOC2002213"
/clone_lib="BRCOC2"
/db_xref="H-InvDB:HIT000489983"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="corpus callosum"
CDS 696..2243
/codon_start=1
/note="highly similar to DNA mismatch repair protein Mlh1"
/protein_id="BAG58325.1"
/transl_table=1
/translation="MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLP
KNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMY
FTQTLLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQKLDAFLQPLS
KPLSSQPQAIVTEDKTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMS
EKRGPTSSNPRKRHREDSDVEMVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINEQG
HEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLR
LSEPAPLFDLAMLALDSPESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEE
GNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYI
SEESTLSGQQSEVPGSIPNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDL
YKVFERC"
BASE COUNT 651 a 515 c 543 g 587 t
ORIGIN
1 ttccctgacg tgccagtcag gccttctcct tttccgcaga ccgtgtgttt ctttaccgct
61 ctcccccgag accttttaag ggttgtttgg agtatgcaaa atccacaagt attcaagtga
121 ttgttaaaga gggaggcctg aagttgattc agatccaaga caatggcacc gggatcagga
181 aagaagatct ggatattgta tgtgaaaggt tcactactag taaactgcag tcctttgagg
241 atttagccag tatttctacc tatggctttc gaggtgaggc tttggccagc ataagccatg
301 tggctcatgt tactattaca acgaaaacag ctgatggaaa gtgtgcatac agagcaagtt
361 actctgatgg aaaactgaaa gcccctccta aaccatgtgc tggcaatcaa gggacccaga
421 tcacggtgga ggaccttttt tacaacatag ccacgaggag aaaagcttta aaaaatccaa
481 gtgaagaata tgggaaaatt ttggaagttg ttggcaggta ttcagtacac aatgcaggca
541 ttagtttctc agttaaaaaa caaggagaga cagtagctga tgttaggaca ctacccaatg
601 cctcaaccgt ggacaatatt cgctccatct ttggaaatgc tgttagtcga gaactgatag
661 aaattggatg tgaggataaa accctagcct tcaaaatgaa tggttacata tccaatgcaa
721 actactcagt gaagaagtgc atcttcttac tcttcatcaa ccatcgtctg gtagaatcaa
781 cttccttgag aaaagccata gaaacagtgt atgcagccta tttgcccaaa aacacacacc
841 cattcctgta cctcagttta gaaatcagtc cccagaatgt ggatgttaat gtgcacccca
901 caaagcatga agttcacttc ctgcacgagg agagcatcct ggagcgggtg cagcagcaca
961 tcgagagcaa gctcctgggc tccaattcct ccaggatgta cttcacccag actttgctac
1021 caggacttgc tggcccctct ggggagatgg ttaaatccac aacaagtctg acctcgtctt
1081 ctacttctgg aagtagtgat aaggtctatg cccaccagat ggttcgtaca gattcccggg
1141 aacagaagct tgatgcattt ctgcagcctc tgagcaaacc cctgtccagt cagccccagg
1201 ccattgtcac agaggataag acagatattt ctagtggcag ggctaggcag caagatgagg
1261 agatgcttga actcccagcc cctgctgaag tggctgccaa aaatcagagc ttggaggggg
1321 atacaacaaa ggggacttca gaaatgtcag agaagagagg acctacttcc agcaacccca
1381 gaaagagaca tcgggaagat tctgatgtgg aaatggtgga agatgattcc cgaaaggaaa
1441 tgactgcagc ttgtaccccc cggagaagga tcattaacct cactagtgtt ttgagtctcc
1501 aggaagaaat taatgagcag ggacatgagg ttctccggga gatgttgcat aaccactcct
1561 tcgtgggctg tgtgaatcct cagtgggcct tggcacagca tcaaaccaag ttataccttc
1621 tcaacaccac caagcttagt gaagaactgt tctaccagat actcatttat gattttgcca
1681 attttggtgt tctcaggtta tcggagccag caccgctctt tgaccttgcc atgcttgcct
1741 tagatagtcc agagagtggc tggacagagg aagatggtcc caaagaagga cttgctgaat
1801 acattgttga gtttctgaag aagaaggctg agatgcttgc agactatttc tctttggaaa
1861 ttgatgagga agggaacctg attggattac cccttctgat tgacaactat gtgccccctt
1921 tggagggact gcctatcttc attcttcgac tagccactga ggtgaattgg gacgaagaaa
1981 aggaatgttt tgaaagcctc agtaaagaat gcgctatgtt ctattccatc cggaagcagt
2041 acatatctga ggagtcgacc ctctcaggcc agcagagtga agtgcctggc tccattccaa
2101 actcctggaa gtggactgtg gaacacattg tctataaagc cttgcgctca cacattctgc
2161 ctcctaaaca tttcacagaa gatggaaata tcctgcagct tgctaacctg cctgatctat
2221 acaaagtctt tgagaggtgt taaatatggt tatttatgca ctgtgggatg tgttcttctt
2281 tctctgtatt ccgata
//