LOCUS AK295314 1393 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59690 complete cds, highly similar to Mus
musculus SH3 and PX domains 2A (Sh3pxd2a), mRNA.
ACCESSION AK295314
VERSION AK295314.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1393)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1393
/clone="BRCAN2022749"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000489938"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 88..1197
/codon_start=1
/note="highly similar to Mus musculus SH3 and PX domains
2A (Sh3pxd2a), mRNA"
/protein_id="BAH12031.1"
/transl_table=1
/translation="MSICCCFFFRDYGSSKRKSGADATAEPMILEQYVVVSNYKKQEN
SELSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEV
SKRRKAHLRRLDRRWTLGGMVNRQHSREEKYVTVQPYTSQSKDEIGFEKGVTVEVIRK
NLEGWWYIRYLGKEGWAPASYLKKAKDDLPTRKKNLAGPVEIIGNIMEISNLLNKKAS
GDKETPPAEGEGHGAPIAKKEISLPILCNASNGSAVGVPDRTVSRLAQGSPAVARIAP
QRAQISSPNLRTRPPPRRESSLTESRCRQAGVQWHDLGSLQSPHPRFKRFSCLSLLSS
WDHRHMPPHPANFLIFLIETGFHHVGQDGLHLLTS"
BASE COUNT 316 a 426 c 395 g 256 t
ORIGIN
1 acatgagcag cggcaccggg gaccgaccgc agccagcccg agggcgcccc tgcagctgca
61 gccccgcgct cgcgcccggc cctaaccatg tctatctgtt gttgcttctt tttcagggac
121 tatggcagtt ccaagaggaa atcaggtgcc gacgccaccg ccgagcccat gatcctggaa
181 cagtacgtgg tggtgtccaa ctataagaag caggagaact cggagctgag cctccaggcc
241 ggggaggtgg tggatgtcat cgagaagaac gagagcggct ggtggttcgt gagcacttct
301 gaggagcagg gctgggtccc tgccacctac ctggaggccc agaatggtac tcgggatgac
361 tccgacatca acacctctaa gactggagaa gtgtccaaga gacgcaaggc ccatctgcgg
421 cgcctggatc gccggtggac cctgggcggg atggtcaaca ggcagcacag ccgagaggag
481 aagtatgtca ccgtgcagcc ttacaccagc caaagcaagg acgagattgg ctttgagaag
541 ggcgtcacag tggaggtgat ccggaagaat ctggaaggct ggtggtatat cagatacctg
601 ggcaaagagg gctgggcgcc agcatcctac ctgaagaagg ccaaggatga cctgccaacc
661 cggaagaaga acctggccgg cccagtggag atcattggga acatcatgga gatcagcaac
721 ctgctgaaca agaaggcgtc tggggacaag gaaactccac cagccgaagg cgagggccat
781 ggggccccca ttgccaagaa ggagatcagc ctgcccatcc tctgcaatgc ctccaatggc
841 agtgccgtgg gcgttcctga caggactgtc tccaggctgg cccagggctc tccagctgtg
901 gccaggattg cccctcagcg ggcccagatc agctccccga acctacggac aagacctcca
961 ccacgcagag aatccagcct gacggagtct cgctgtcgcc aggctggagt gcagtggcac
1021 gacctcggct cactacaatc tccacatccc aggttcaaga gattctcctg cctcagcctc
1081 ctgagtagtt gggatcatag gcacatgcca ccacacccag ctaatttttt aatattttta
1141 atagagacgg ggtttcacca tgttggccaa gatggtctcc atctcctcac ctcgtgatct
1201 gccagcctcg gctcccaaag tgctgggatt gctggggtga gccgctgcgc ccggccttcc
1261 tctccttttt aacaatcctc gcctccctct ttccctcctt ccttctctcc tcccttcaac
1321 aaatccttac caaggaccta ccaggcatca ggccccgtgc agacagaaag ctagagacag
1381 cccctgactt caa
//