LOCUS AK295278 1567 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61770 complete cds, highly similar to Sorting
nexin-17.
ACCESSION AK295278
VERSION AK295278.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1567)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1567
/clone="BRCAN2015879"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000489902"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 577..1347
/codon_start=1
/note="highly similar to Sorting nexin-17"
/protein_id="BAG58262.1"
/transl_table=1
/translation="MENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKE
FLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVT
RMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSI
CLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKL
SSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL"
BASE COUNT 327 a 423 c 464 g 353 t
ORIGIN
1 atcggatcgc agggctccca aaatggcgag tgaggctgcg gggactcgct gagcagcgga
61 gggggagcgt gcagagccgc tgcggccctc acagtccgga gcccggccgt gccgtgccgt
121 agggaacatg cacttttcca ttcccgaaac cgagtcccgc agcggggaca gcggcggctc
181 cgcctacgtg ttcggcaaga cccattgctt gggagcagcg agactttcaa cagtttcctg
241 cgtcgggcac aacaggagac acagcaggtc cccacagagg aagtgtcctt ggaagtgctg
301 ctcagcaacg ggcagaaagt tctggtcaac gtgctaactt cagatcagac tgaggatgtc
361 ctggaggctg tagctgcaaa gctggatctt ccagatgact tgattggata ctttagtcta
421 ttcttagttc gagaaaaaga ggatggagcc ttttcttttg tacggaagtt gcaagagttt
481 gagctgcctt atgtgtctgt caccagcctt cggagtcaag agtataagat tgtgctaagg
541 aagagttatt gggactctgc ctatgatgac gatgtcatgg agaaccgggt tggcctaaac
601 ctgctttatg ctcagacggt atcagatatt gagcgtgggt ggatcttggt caccaaggaa
661 cagcaccggc aactcaaatc tctgcaagag aaagtctcca agaaggagtt cctgagactg
721 gcccagacgc tgcggcacta tggctacttg cgctttgatg cctgtgtggc tgacttccca
781 gaaaaggact gtcctgtggt ggtgagcgcg ggcaacagtg agctcagcct gcagctccgc
841 ctgcctggcc agcaactccg agaaggctcc ttccgggtca cccgcatgcg atgctggcgg
901 gtcacctcct ctgtaccatt gcccagtgga agcacgagca gcccaggccg gggccggggt
961 gaggtgcgcc tggaactggc ttttgaatac ctcatgagca aggaccggct acagtgggtc
1021 accatcacta gcccccaggc tatcatgatg agcatctgct tgcagtccat ggttgatgaa
1081 ctgatggtga agaaatctgg cggcagtatc aggaagatgc tgcgccggcg ggtggggggt
1141 actctgagac gctcagacag ccagcaagca gtgaagtccc caccactgct tgagtcacct
1201 gatgccaccc gggagtctat ggtcaaactc tcaagtaagc tgagtgccgt gagcttgcgg
1261 ggaattggca gtcccagcac agatgccagt gccagtgatg tccacggcaa tttcgccttc
1321 gagggcattg gagatgagga tctgtaatct ccactgcttg gatgtctgcc ctctacccca
1381 gaggaattta cagaaacttg ccctgtgcct gtgtccccca tgctaggggc ggaggggtct
1441 tttccttctt ctttcctacc tacccctttt ctcttggcca ggggcctcgt atcctacctt
1501 tccttgtccc ctgggctggc tgcacagagg attgcccctt ctcttttcag agctggccct
1561 cgatgcc
//