LOCUS AK295263 2032 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59689 complete cds, highly similar to Mus
musculus phosphatase and actin regulator 1 (Phactr1), transcript
variant 1, mRNA.
ACCESSION AK295263
VERSION AK295263.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2032)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2032
/clone="BRCAN2013600"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000489887"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 333..1976
/codon_start=1
/note="highly similar to Mus musculus phosphatase and
actin regulator 1 (Phactr1), transcript variant 1, mRNA"
/protein_id="BAG58252.1"
/transl_table=1
/translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPP
TLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGT
HTPPIRRRSKFANLGRIFKPWKCRKKKSEKFKHTSAALERKISMRQSREELIKRGVLK
EIYDKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIM
DGPVSEESPSASESGVLLSQDPSAKPVLLLPPKKPAAFPGDHEETPVKQLPLLKQPPA
LPPKPTTRIANHLTDPGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQK
SGQQGVAQHHHTVLPSQIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMT
MQRLESSEQRVPCSTSYHSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPH
ESDYEDSSCLYTREEEEEEEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEE
KNILPRQTDEERLELRQQIGTKLTRNKFRRDFGRQLEGK"
BASE COUNT 527 a 566 c 524 g 415 t
ORIGIN
1 attttcttaa attagcagtc taatgtgttc taaagagcag ctccactcag atctcttctt
61 aagggttgca tttcatcaca gtataaatgg gcaaatccat cacttccctc tgctcagtgc
121 tcttgaagcg agattgaagg gaaaattaga agctgttcat ttgtgcttgc gggctcagaa
181 gcgtcgcact gctttgtttt gtactctacc gtgtcctgtt gaaaggggtc aacaagtgcc
241 ggggagggtg cagaggctga ggctggcgtc accttccgtt gctaaggtgt tccagtgttt
301 tctctcaaaa ctctgtgttt ggaacatcaa ggatggatta tcccaaaatg gattattttc
361 tggatgtaga gtctgctcac agactcttgg atgttgagtc agctcaaaga ttcttctaca
421 gtcaaggagc tcaagctcgc cgggcgaccc tgctcctgcc tcccacatta atggcggcat
481 cctcggagga tgatatagac cggcggccca tccggagagt gcgctccaag agcgacacgc
541 cgtacctcgc agaggccagg atctccttta acctgggggc agctgaggaa gtggagaggc
601 tggcggcgat gcgttctgac tccctcgtcc caggcaccca caccccaccc atccgcagga
661 gaagtaagtt tgccaacctg ggaaggattt tcaagccttg gaaatgtagg aagaagaaaa
721 gcgaaaagtt caaacacacg tcagcagccc tggaaaggaa aatatctatg aggcaaagca
781 gagaagagct gataaagcga ggagtcctga aggaaatcta tgataaagat ggggaactct
841 ctatatccaa tgaagaggac tccctagaaa atgggcagtc cctgagctcc agccagctgt
901 ctctgcctgc cctgtccgaa atggagccag tcccaatgcc cagggatccc tgctcatatg
961 aggtgctcca accgtcagac atcatggatg ggccagtgtc tgaagagagt ccctctgcca
1021 gtgagtctgg agtcctcctg tcccaagatc cttcagccaa accagtcctg ctactgcccc
1081 ccaaaaaacc tgctgctttc cctggagacc atgaagagac cccagtgaag cagctgcccc
1141 ttctcaagca gcccccggcc ctgcctccca aacccactac caggattgcc aaccacttaa
1201 cagatcctgg cgcccctgtg aaattgcctt gtctgccagt gaaactgtcg cctccgctac
1261 ctccaaagaa agtcatgatc tgtatgcccg tgggggggcc agacctctca ctggtgtcct
1321 acacagccca gaagagtggc cagcagggtg tggcccagca ccaccacact gtcctgccct
1381 cccagatcca gcaccagctg cagtacggca gccacggcca gcacctcccc tccaccaccg
1441 gctccctccc catgcacccc tcgggctgca gaatgataga cgagctcaac aaaacgctgg
1501 ccatgaccat gcagaggctg gaaagctctg agcagcgggt cccctgttcc acttcttacc
1561 acagctctgg gttgcactcg ggtgatgggg tcaccaaagc aggacctatg ggccttccag
1621 aaataagaca agtgccaact gttgtgattg aatgtgatga caataaagaa aatgtgcctc
1681 atgagtcaga ctacgaagac tcttcttgcc tgtatacaag agaagaggag gaagaggagg
1741 aggacgaaga cgacgacagc tcattataca ccagctccct ggccatgaag gtctgcagga
1801 aggactcctt agccatcaaa ctcagcaaca ggccctccaa gcgagagctg gaagaaaaga
1861 acatccttcc caggcagacg gatgaggagc ggctggagct gaggcaacag attggcacca
1921 agctcaccag aaacaagttc agaagagact ttgggagaca gctggaagga aaatagctgt
1981 ggccccactg aatgaggagg gaaaggatcg ggattcctgc cacccgtctc ct
//