LOCUS AK295181 3167 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59233 complete cds, highly similar to Alpha-2
catenin.
ACCESSION AK295181
VERSION AK295181.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3167)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3167
/clone="BRAWH3048512"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489805"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 79..2661
/codon_start=1
/note="highly similar to Alpha-2 catenin"
/protein_id="BAH12003.1"
/transl_table=1
/translation="MTSATSPIILKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNK
GPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAKESQDLKEELVAAVEDVRKQGET
MRIASSEFADDPCSSVKRGAMVRAARALLSAVTRLLILADMADVMRLLSHLKIVEEAL
EAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKKNAT
MLYTASQAFLRHPDVAATRANRDYVFKQVQEAIAGISNAAQATSPTDEAKGHTGIGEL
AAALNEFDNKIILDPMTFSEARFRPSLEERLESIISGAALMADSSCTRDDRRERIVAE
CNAVRQALQDLLSEYMNNTGRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSF
LETNVPLLVLIEAAKSGNEKEVKEYAQVFREHANKLVEVANLACSISNNEEGVKLVRM
AATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDD
FLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVY
TEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIR
KAVLMIRTPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAK
IAEQVEIFHQEKSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSD
VINAAKKIAEAGSRMDKLARAVADQLDSATSLIQAAKNLMNAVVLTVKASYVASTKYQ
KVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEEFQTRVRRGSQKKHISPVQALSEFKA
MDSF"
BASE COUNT 914 a 702 c 855 g 696 t
ORIGIN
1 gtgattacca ctccagctgc tgggaacggg cgagaaagag gaggaggcga gaaactccca
61 ccgacccaca gagggagcat gacttcggca acttcaccta tcattctgaa atgggacccc
121 aaaagtttgg aaatccggac gctaacagtg gaaaggctgt tggagccact tgttacacag
181 gtgactacac ttgtcaacac aagcaacaaa ggcccatctg gtaaaaagaa agggaggtca
241 aagaaagccc atgtactagc tgcctctgta gagcaagcca ctcagaattt cctggaaaag
301 ggtgaacaga tcgctaagga gagtcaagat ctcaaagaag agttggtggc tgctgtagag
361 gatgtgcgca aacaaggtga gacgatgcgg atcgcctcct ccgagtttgc agatgaccct
421 tgctcgtcgg taaagcgcgg cgccatggta cgggcggcaa gggctttgct ctccgcggtg
481 acacgcttac tcatcctggc ggacatggca gatgtcatga gacttttatc ccatctgaaa
541 attgtggaag aggccctgga agctgtcaaa aatgctacaa atgagcaaga ccttgcaaac
601 cgttttaaag agtttgggaa agagatggtg aaacttaact atgtagcagc aagaagacaa
661 caggagctga aggatcctca ctgtcgggat gagatggcag ccgcccgagg ggctctgaag
721 aagaatgcca caatgctgta cacggcctct caagcatttc tccgccaccc agatgtcgcc
781 gctacgagag ccaaccgaga ttatgtgttc aaacaagtcc aggaggccat cgccggcatc
841 tccaatgctg ctcaagctac ctcgcccact gacgaagcca agggccacac gggcatcggc
901 gagctggctg cggctcttaa tgagtttgac aataagatta tcctggaccc catgacgttc
961 agcgaggcca ggttccggcc gtccctggag gagaggctgg agagcatcat cagcggcgca
1021 gcgctgatgg ccgactcctc ctgcacgcga gacgaccggc gcgagaggat cgtggcggag
1081 tgcaacgccg tgcggcaggc gctccaggac ctgctcagcg agtacatgaa taatactgga
1141 aggaaagaaa aaggagatcc tctcaacatt gcgattgata agatgactaa gaaaacaaga
1201 gatctaagga gacagcttcg gaaagcagtg atggatcaca tatctgactc tttcctggaa
1261 accaatgttc ctttgctagt tctcattgag gctgcaaaga gcggaaatga aaaggaagtg
1321 aaagaatatg cccaagtttt ccgtgagcat gccaacaaac tggtagaggt tgccaatttg
1381 gcctgttcca tctccaacaa tgaagaaggg gtgaaattag ttcggatggc agccacccag
1441 attgacagcc tgtgtcccca ggtcatcaat gccgctctga cactggctgc ccggccacag
1501 agcaaagttg ctcaggataa catggacgtc ttcaaagacc agtgggagaa gcaggtccga
1561 gtgttgacag aggccgtgga tgacatcacc tcagtggatg acttcctctc tgtctcagaa
1621 aatcacatct tggaggatgt gaacaagtgt gtgatagccc tccaagaggg cgatgtggac
1681 actctggacc ggactgcagg ggccatcagg ggccgggcag ctcgagtcat acacatcatc
1741 aatgctgaga tggagaacta tgaagctggg gtttatactg agaaggtgtt ggaagctaca
1801 aaattgcttt ctgaaacagt gatgccacgc ttcgctgaac aagtagaggt tgccattgaa
1861 gccctgagtg ccaacgttcc tcaaccgttt gaggagaatg agttcatcga tgcctctcgc
1921 ctggtgtatg atggcgttcg ggacatcaga aaggctgtgc tgatgatcag gaccccagaa
1981 gaactagagg atgattctga ctttgagcag gaagattatg atgtgcgtag caggacaagt
2041 gttcagactg aggatgacca gctcattgca gggcagagcg cacgggccat catggcgcaa
2101 ctaccgcagg aggagaaggc aaaaatagct gagcaggtgg agatattcca tcaagagaaa
2161 agcaagctgg atgcagaagt ggccaaatgg gacgacagcg gcaatgatat cattgtactg
2221 gccaagcaga tgtgtatgat catgatggaa atgacagact tcacaagagg caaaggccca
2281 ttgaaaaata catctgatgt cattaatgct gccaagaaaa ttgccgaagc aggttctcga
2341 atggacaaat tagctcgtgc tgtggctgat cagctggaca gtgccacatc gcttatccag
2401 gcagctaaaa acctgatgaa tgctgttgtc ctcacggtga aagcatccta tgtggcctca
2461 accaaatacc agaaggtcta tgggacagca gctgtcaact cacctgttgt gtcttggaag
2521 atgaaggctc cagagaagaa gccccttgtg aagagagaaa agcctgaaga attccagaca
2581 cgagttcgac gaggttctca gaagaaacac atttcgcctg tacaggcttt aagtgaattc
2641 aaagcaatgg attccttcta ggacgatagg ttttaacaag aaagcttttt ctttcttttc
2701 tttctttctt tttcttttta attccatttt tgtatgcata cctgccagct cgtatgcctc
2761 tggcatgggg aaattaaggg aacagtgtct gtttgcatgt aagatgagat gagatcaata
2821 ctactgatcc atctgtagcc tgggaaggag acaggacatt cctgtactaa ggtggcacag
2881 agctgtcctt tgcaacattc tcataaaatt gggcacagag ttcgcattgg cgcaatattt
2941 atgggagtgg gagggatggg gaaaataaac ttaactctac aaaagcaaac tctaatgcat
3001 gcaagaatca ttaggttggc aggtatatgc ataagtgaaa aatctggaag tgtaatggta
3061 gaacataaaa cttgtattgc ttctgtttca gtgcaaaaat gtactagcca atacgcttaa
3121 gtgtgtggcc catgaattga acaatttaac cttgaagtct atatccg
//