LOCUS AK295141 2699 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60538 complete cds, highly similar to Homo
sapiens FCH domain only 2 (FCHO2), mRNA.
ACCESSION AK295141
VERSION AK295141.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2699)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2699
/clone="BRAWH3044862"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489765"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 27..2360
/codon_start=1
/note="highly similar to Homo sapiens FCH domain only 2
(FCHO2), mRNA"
/protein_id="BAG58162.1"
/transl_table=1
/translation="MVMAYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERAT
IEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQ
KYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQ
REIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQVHEEFINNMANTTVESLI
QKFAESKGTGKERPGLIEFEECDTASAVEGIKPRERKTFALPGIIKKEKDAESVECPD
ADSLNIPDVDEEGYSIKPETNQNDTKENHFYSSSDSDSEDEEPKKYRIEIKPMHPNNS
HHTMASLDELKVSIGNITLSPAISRHSPVQMNRNLSNEELTKSKPSAPPNEKGTSDLL
AWDPLFGPSLDSSSSSSLTSSSSARPTTPLSVGTIVPPPRPASRPKLTSGKLSGINEI
PRPFSPPVTSNTSPPPAAPLARAESSSSISSSASLSAANTPTVGVSRGPSPVSLGNQD
TLPVAVALTESVNAYFKGADPTKCIVKITGDMTMSFPSGIIKVFTSNPTPAVLCFRVK
NISRLEQILPNAQLVFSYPSQCDSNTKDFWMNMQAVTVYLKKLSEQNPAASYYNVDVL
KYQVSSNGIQSTPLNLATYWKCSASTTDLRVDYKYNPEAMVAPSVLSNIQVVVPVDGG
VTNMQSLPPAIWNAEQMKAFWKLSSISEKSENGGSGSLRAKFDLSEGPSKPTTLAVQF
LSEGSTLSGVDFELVGTGYRLSLIKKRFATGRYLADC"
BASE COUNT 905 a 542 c 546 g 706 t
ORIGIN
1 gcggaacccg gcgcggcggc ggcacgatgg tcatggcgta tttcgtcgag aatttttggg
61 gggaaaaaaa tagtggcttt gatgtcctct accataatat gaaacatgga cagatatcaa
121 caaaagaact agcagatttt gtaagggaac gagctaccat agaggaggca tactccaggt
181 caatgacaaa actagcaaaa tctgcaagca attattcaca acttggaaca tttgcaccag
241 tatgggatgt attcaaaaca tctacagaga aattagcaaa ttgtcacttg gatcttgtta
301 gaaaattaca agaattaata aaggaagttc agaagtatgg agaagaacaa gtaaagtctc
361 ataaaaagac taaagaagaa gttgcaggaa ctctggaagc tgtccaaacc attcagagca
421 taactcaggc cctccagaaa tccaaggaaa attacaatgc caagtgtgta gaacaggagc
481 gtttgaaaaa ggaaggagct acacaaagag aaatagaaaa ggcagctgtt aaatctaaga
541 aagctacaga tacctataaa ctctatgtgg aaaaatatgc attagcaaaa gctgatttcg
601 aacagaaaat gacagaaaca gctcaggtcc atgaagaatt tataaataac atggctaata
661 ctacagttga aagtttgata caaaaatttg ctgagtcaaa aggcactggg aaggaaagac
721 ctggcctcat tgaatttgaa gaatgtgaca ctgctagtgc agttgaaggt ataaaaccaa
781 gggaaagaaa gacctttgct ttgccaggaa tcattaaaaa ggaaaaagat gcagaatctg
841 tggaatgtcc tgatgcagat tcattgaaca ttcctgatgt agatgaagaa ggctacagta
901 ttaaaccaga aacgaatcag aatgatacca aagagaacca tttctactca tctagtgatt
961 ctgactccga agatgaagaa ccaaagaagt atcggataga aattaagcct atgcatccaa
1021 ataactcaca tcacacaatg gcttctttgg atgaattaaa agtatctata gggaatataa
1081 cactctcccc agcaatatct agacacagtc cagtacagat gaatcggaat ttgtctaatg
1141 aggagttaac aaaatcaaag ccatctgctc cacccaatga aaaaggaacc agtgatttac
1201 ttgcttggga ccccctattt ggaccatctc ttgattcatc ttcttcatct tcactaactt
1261 catcatcatc agccaggccc acaactcctc tttctgtagg caccattgtc ccacctccga
1321 ggcctgcttc cagaccaaag cttacttcag gcaaactcag tgggattaat gaaataccca
1381 ggccattcag cccacctgta acttccaaca ccagcccacc tcctgctgca ccattagccc
1441 gggcagaaag ttcttcttct atctcatcat ctgcttcatt gagtgctgcc aatactccaa
1501 cagtaggtgt gtcacggggt cccagccctg tcagccttgg aaatcaggat accttacctg
1561 tggcagttgc ccttacagaa tctgttaatg cctactttaa aggagcagat cccaccaagt
1621 gtattgtgaa gatcactggt gatatgacaa tgtcatttcc aagtggaatt attaaagtct
1681 tcaccagcaa tccaactcca gctgtgttgt gcttcagggt gaaaaatatc agcagactag
1741 agcagattct tccaaatgca cagcttgtgt tcagttatcc atcacaatgt gattccaaca
1801 caaaagattt ttggatgaac atgcaagctg ttacagtcta cctcaagaag ctgtcagagc
1861 aaaatccagc tgcttcttat tataatgtag atgtattaaa gtatcaggta tcatcaaatg
1921 gtattcagtc cactcctctg aatcttgcaa catactggaa atgtagtgct agcaccacag
1981 atcttagagt ggattataaa tacaatccag aagctatggt ggcacctagt gtgctttcca
2041 acatacaggt ggtggtacca gtggatggag gagtaacgaa catgcagtcc cttccccctg
2101 caatatggaa tgcagaacaa atgaaagcct tttggaaatt gtctagtatt tcagaaaaat
2161 cagaaaatgg aggttctggg tccctccgag caaaatttga tctttcagaa ggacctagta
2221 aacccacgac acttgcagta caattcctca gcgagggaag taccctttca ggagtagatt
2281 tcgaacttgt gggcactggc tataggcttt ccttaataaa gaagcggttt gctactggac
2341 gatacctggc ggattgttga tggacctggg aaagtgatgt ggcttcaggg attacaaacc
2401 tgccattctg cattatctgt tctttccaaa cactatttta acttgtatga tgtctttcaa
2461 acttagacat atttgagagc tgactacaaa cattaaatcg cacttttaaa gtgagtcatt
2521 gaaataaata gtactgaaat gattctctat gttgtaaatg atcaactaca atattcagga
2581 agcacattta ttcagattct cagtaaaaat gaagtttttg taggattaat ttttaaatta
2641 tttccagtgt ctatgttgaa aaaaagggtt atagtgtaat atcaggccta aagtttcag
//