LOCUS AK295138 3724 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61262 complete cds, highly similar to Ubiquitin-protein ligase E3C (EC 6.3.2.-). ACCESSION AK295138 VERSION AK295138.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3724) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3724 /clone="BRAWH3044490" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000489762" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 434..3244 /codon_start=1 /note="highly similar to Ubiquitin-protein ligase E3C (EC 6.3.2.-)" /protein_id="BAG58161.1" /transl_table=1 /translation="MSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYLPVLQDASYV VSVIEQILHYMIHNGYYRSLYLLINSKLPSSIEYSDLSRVPIAKILLENVLKPLHFTY NSCPEGARQQVFTAFTEEFLAAPFTDQIFHFIIPALADAQTVFPYEPFLNALLLIESR CSRKSGGAPWLFYFVLTVGENYLGALSEEGLLVYLRVLQTFLSQLPVSPASASCHDSA SDSEEESEEADKPSSPEDGRLSVSYITEECLKKLDTKQQTNTLLNLVWRDSASEEVFT TMASVCHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWFLISSMSTRMITGSMVPLLQV ISRGSPMSFEDSSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEVVGQRQSSMMPFTL EELIMLSRCLRDACLGIIKLAYPETKPEVREEYITAFQSIGVTTSSEMQQCIQMEQKR WIQLFKVITNLVKMLKSRDTRRNFCPPNHWLSEQEDIKADKVTQLYVPASRHVWRFRR MGRIGPLQSTLDVGLESPPLSVSEERQLAVLTELPFVVPFEERVKIFQRLIYADKQEV QGDGPFLDGINVTIRRNYVYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGG IFREFLNELLKSGFNPNQGFFKTTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKAL YENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEDDVEELGLNF TVVNNDLGEAQVVELKFGGKDIPVTSANRIAYIHLVADYRLNRQIRQHCLAFRQGLAN VVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFWRVVEGF TDVEKRKLLKFVTSCSRPPLLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFY DETLLRSKLLYAIECAAGFELS" BASE COUNT 976 a 832 c 890 g 1026 t ORIGIN 1 cttcgaaggc gacttcaaga cgcggcccaa ggtgtccctt ggcggcgcga gcaggaagga 61 ggaaaaggct tctcttttac atcgtactca ggaagaaaga agaaagagag aggaagaaag 121 gcgaaggttg aaaaatgcaa taattatcca gtcatttatt cgaggctata gagacagaaa 181 acagcaatat tccacccaaa gaagtgcatt tgatcgctgt gctaccttgt cacagtccgg 241 gggcgctttt cccattgcta atggccccaa ccttaccctt ttggtaaggc agcttctgtt 301 tttttacaaa caaaatgaag actcaaaacg tttgatatgg ctgtatcaga acttaattaa 361 acacagctct ctgtttgtca agcagttgga tggatctgag agacttacat gcttatttca 421 gataaaaaga ttgatgagcc tctgttgcag gttgctgcaa aactgtaatg atgacagttt 481 gaatgttgca cttccaatga gaatgcttga agtattttcg tctgagaata cttacttgcc 541 tgttttacaa gatgctagct atgtggtgtc agtgattgaa caaattttgc actacatgat 601 tcacaatggg tattataggt ctctatattt gttgattaac agcaagcttc catcaagtat 661 tgaatattct gatttatctc gagttcctat agcaaaaatt ttgctagaga atgttctaaa 721 accattgcac tttacttaca actcctgtcc ggaaggtgcg aggcaacaag tttttacagc 781 cttcacagag gagtttctgg cagcaccttt tacagatcag atttttcatt tcatcattcc 841 ggcgcttgca gatgcgcaga ccgttttccc ttacgagccc tttctgaatg cactgttgtt 901 aatagagagt agatgttcaa gaaagagtgg tggagcaccc tggcttttct atttcgtttt 961 aactgttggc gaaaattatt tgggggccct ctctgaggaa gggctgctgg tgtatttgcg 1021 ggtgctgcag accttcctct ctcagttacc agtctctcct gccagcgcga gctgtcacga 1081 ctcagccagt gactctgagg aggagagtga agaagccgac aagccctcaa gcccggagga 1141 tggcagactg tcagtatcat acataacaga ggaatgcctg aagaagctgg acacaaagca 1201 gcagaccaac accctgctca acctggtgtg gagggactct gcgagcgagg aggtcttcac 1261 caccatggcc tccgtctgcc acacgctgat ggtgcagcac cgcatgatgg tacccaaagt 1321 caggcttctc tacagtttag cctttaatgc caggtttctg agacatcttt ggtttctaat 1381 atcttccatg tcaacacgga tgatcacagg gtctatggta ccgttgcttc aggtgatatc 1441 caggggttct cctatgtctt ttgaagattc tagtcgaatc atcccactct tttatctttt 1501 tagctccttg tttagtcatt cactaatttc catacatgat aacgaattct tcggtgatcc 1561 catagaagtt gtaggtcaaa gacaatcatc aatgatgcct tttactttag aagagctgat 1621 aatgttgtct cgatgccttc gagatgcatg cctggggatc atcaagttgg cttatccaga 1681 aaccaagcca gaagttcgag aagaatatat tacagcattt cagagtattg gagttactac 1741 tagctctgaa atgcaacaat gcatacagat ggaacagaaa agatggattc agttatttaa 1801 ggttatcacc aatctagtga aaatgttgaa gtccagagac acgaggagaa atttttgtcc 1861 tccaaaccac tggctgtcag aacaagaaga tattaaagca gataaggtca ctcagctcta 1921 tgtgccagca tccagacatg tgtggaggtt ccggcggatg gggaggatag gcccgctgca 1981 gtccaccctg gacgtgggtt tggagtcccc gccgctgtct gtgtctgagg aaagacagct 2041 tgctgtcctg acagagttgc cttttgtggt tccatttgag gaacgagtaa agatctttca 2101 gaggttgatt tatgcagata agcaagaagt tcaaggagat ggtccatttc tggatggaat 2161 taatgtcaca ataagaagaa attacgttta tgaagatgct tatgacaaac tttctccaga 2221 aaatgagcct gatttgaaaa agcggatccg tgtgcacttg ctcaatgccc atggcctgga 2281 tgaagctggc attgatggtg gtggtatttt cagagagttt ttaaatgaac tactgaagtc 2341 aggatttaac cccaaccagg ggttctttaa gactactaat gaagggcttc tgtaccccaa 2401 cccggctgct cagatgcttg tgggagattc ttttgccaga cattactact tcctaggcag 2461 aatgcttgga aaggctctct atgagaacat gctggtggag ctgccctttg caggcttctt 2521 tctttccaag ttgcttggaa ccagtgccga cgtggacatt caccacctcg cctccctaga 2581 ccctgaggtg tataagaatt tgctctttct gaagagctac gaagacgatg tggaggagct 2641 tgggctgaac ttcactgtgg tgaacaatga cctgggagag gcgcaggtag ttgaactaaa 2701 attcggtggg aaagacatcc ctgtcaccag cgccaaccgg attgcgtaca tccacttggt 2761 ggcagactac aggctgaaca ggcagatccg ccagcactgc ctggctttcc gccagggcct 2821 tgccaatgtc gtcagcctcg agtggctccg aatgtttgat cagcaagaaa ttcaggtatt 2881 aatttctggt gcacaagttc ccataagcct agaggaccta aaatccttta caaactattc 2941 aggaggctat tctgcagacc atcctgttat taaggtcttc tggagagttg tggaagggtt 3001 cactgatgta gaaaagcgca aactgctgaa gtttgtaaca agctgctctc gaccccctct 3061 cttggggttt aaggagttgt atcccgcatt ttgtattcac aacggaggct ccgaccttga 3121 gcggctcccc acagccagca cctgcatgaa cctgctgaag ctccccgagt tctatgacga 3181 gacacttttg cgaagtaaac ttctctatgc gattgaatgt gccgctggct ttgagctgag 3241 ctgaagctga tgctggggtc agacccctac agagaaccag tgcttccttc gtcagcagcg 3301 cctccccaga cccacgagga tacccacact gcacgcctga ggctctccta agctccttct 3361 ttcattctgc cattcctccc tcccttcctt ttttaaatga tttttattac ggtgtggtca 3421 cttatttaga tggacattgc ttttcaaata acttaaaata acacgttatg tgccatgtgg 3481 ctactttagt aatattgcca agaagagcac agtttttaca ctagtggcat ctcagtgaaa 3541 ttaaccaaag atgaagcttt ggctttgctg gtgagatcag agccctcctg agcaggcagc 3601 gccactccag ggttcagaca gggctgcaca ggcggcagag atacagggtc tgagggctga 3661 gacgccatgg ggccgctgct gcttatgtgg ttggattgtt tacaagcctc attattaaaa 3721 ctga //