LOCUS AK295135 4212 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58180 complete cds, highly similar to Ankyrin
repeat domain-containing protein 50.
ACCESSION AK295135
VERSION AK295135.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4212)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4212
/clone="BRAWH3044163"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489759"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 301..4053
/codon_start=1
/note="highly similar to Ankyrin repeat domain-containing
protein 50"
/protein_id="BAG58158.1"
/transl_table=1
/translation="MKPPQQSLYLLVDSVDEGCNITEGEQTSTSLSGTVAALLAGHHE
FFPPWLLLLCSARKQSKAVTKMFTGFRKISLDDLRKAYIVKDVQQYILHRLDQEEALR
QHLTKETAEMLNQLHIKSSGCFLYLERVLDGVVENFIMLREIRDIPGTLNGLYLWLCQ
RLFVRKQFAKVQPILNVILAACRPLTITELYHAVWTKNMSLTLEDFQRKLDILSKLLV
DGLGNTKILFHYSFAEWLLDVKHCTQKYLCNAAEGHRMLAMSYTCQAKNLTPLEAQEF
ALHLINSNLQLETAELALWMIWNGTPVRDSLSTLIPKEQEVLQLLVKAGAHVNSEDDR
TSCIVRQALEREDSIRTLLDNGASVNQCDSNGRTLLANAAYSGSLDVVNLLVSRGADL
EIEDAHGHTPLTLAARQGHTKVVNCLIGCGANINHTDQDGWTALRSAAWGGHTEVVSA
LLYAGVKVDCADADSRTALRAAAWGGHEDIVLNLLQHGAEVNKADNEGRTALIAAAYM
GHREIVEHLLDHGAEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCD
KDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFW
GAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRL
ICEALIEQGARTNEIDNDGRIPFILASQEGHYDCVQILLENKSNIDQRGYDGRNALRV
AALEGHRDIVELLFSHGADVNCKDADGRPTLYILALENQLTMAEYFLENGANVEASDA
EGRTALHVSCWQGHMEMVQVLIAYHADVNAADNEKRSALQSAAWQGHVKVVQLLIEHG
AVVDHTCDQGATALCIAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQI
IKLLEKYGASSLNGCSPSPVHTMEQKPLQSLSSKVQSLTIKSNSSGSTGGGDMQPSLR
GLPNGPTHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTVPIDSF
HNLSFTEQIQQHSLPRSRSRQSIVSPSSTTQSLGQSHNSPSSEFEWSQVKPSLKSTKA
SKGGKSENSAKSGSAGKKAKQSNSSQPKVLEYEMTQFDRRGPIAKSGTAAPPKQMPAE
SQCKIMIPSAQQEIGRSQQQFLIHQQSGEQKKRNGIMTNPNYHLQSNQVFLGRVSVPR
TMQDRGHQEVLEGYPSSETELSLKQALKLQIEGSDPSFNYKKETPL"
BASE COUNT 1252 a 809 c 1032 g 1119 t
ORIGIN
1 agttactgcc ctgacggcgg cggcggcggc ggttggccgg tgggggctgg ggcgagcacg
61 accgattctg ctgggaaagc tggaactggc agccgccggg ggccaagagg aggatccgga
121 gctgggagcg tgccccgggc ccggcggagg aggcggctgc agttggagtg gagtcttggg
181 agcgctgctg gcagcgactt ctcagcgaag caagtgtctg agactgagag tccctaacag
241 cggcagcggc ggccacggcg gcggctgggg ccgaggtgtg ttctactccc tcttctggga
301 atgaagcctc cccagcaaag cctatacctg cttgttgatt ctgttgatga agggtgtaac
361 attactgaag gtgaacaaac gtctaccagc ttatctggga ctgttgcagc acttttagct
421 ggtcaccatg agttctttcc accatggcta ttgcttctct gttctgcccg aaagcagagt
481 aaggctgtta ctaaaatgtt tactggtttt cgaaaaataa gtttagatga ccttcggaag
541 gcatatatcg tcaaggatgt tcagcagtac attcttcatc gtttagatca agaagaagct
601 ttgcgacaac acctcacaaa agaaactgca gagatgttaa atcaactgca cattaaaagc
661 agtggatgct ttctttacct agaacgagtt ttagatggag ttgtagaaaa ttttattatg
721 ttaagagaaa ttcgtgacat cccaggaact ctaaatggtt tatatctctg gctgtgccaa
781 agactttttg taagaaaaca atttgcaaag gttcagccta ttttgaatgt gattcttgca
841 gcctgccgac ctttgaccat aacggaatta tatcacgcag tatggaccaa aaacatgtcg
901 ttaactttgg aagattttca acgcaagtta gatatcctct ccaaacttct tgttgatgga
961 ctaggaaata caaaaatact gtttcattat agttttgccg agtggcttct ggatgtgaaa
1021 cactgtactc agaagtattt atgtaatgca gcagaaggac acagaatgtt ggctatgagt
1081 tatacctgtc aagccaagaa tttaacacca ttggaagcac aagaatttgc attgcactta
1141 attaactcaa acttacaatt agagacagcg gagttagctc tgtggatgat atggaatggt
1201 acacctgtca gagattccct ttctactttg atacccaagg aacaagaagt gctacagctg
1261 ttggttaaag ctggggctca tgtcaacagt gaagacgatc gcacatcatg catagttcga
1321 caagccttag aaagagagga ttccattcgg acattattag ataatggagc ttcagtaaat
1381 cagtgtgatt caaatgggag aacattattg gctaatgctg catatagtgg cagtcttgat
1441 gtagtcaatt tacttgtctc taggggagca gatttagaga tagaagatgc tcatggacat
1501 acaccactca ctctagcggc tagacaggga cataccaagg tggttaattg tttgattggg
1561 tgtggagcaa atattaatca tactgatcaa gatggttgga cagcattaag atctgctgct
1621 tggggtggcc atactgaggt agtttctgca ctactttatg ctggcgtaaa agtggattgt
1681 gcagatgctg atagccgaac agctttgaga gcagcagcat ggggaggaca cgaggatatt
1741 gtactgaatt tgctacaaca tggcgctgaa gtgaacaaag ctgataatga aggtagaact
1801 gctttgatag cagcagcata catgggacat agagagattg tggaacacct actggaccat
1861 ggagcagaag taaatcatga ggatgttgat ggcaggactg cactctctgt agctgcactt
1921 tgtgtgcctg caagtaaagg gcacgcatca gttgttagcc ttttaattga tcgaggtgct
1981 gaagtagatc attgtgataa agatggcatg actccactgc tggtagctgc ctatgaagga
2041 catgttgatg tggttgactt gcttctagaa gggggagcag atgtagatca cacagataac
2101 aatggccgta cacccctctt agcagcagcg tctatgggtc atgcatcagt tgtaaataca
2161 cttttgtttt ggggtgcagc tgtggatagt attgatagtg aaggtaggac agtcctcagt
2221 atagcttcag cacaaggaaa tgttgaggtg gtacgtactc tactggatag agggttagat
2281 gaaaatcaca gagatgatgc tggatggaca cctttgcaca tggcagcttt tgaagggcac
2341 agattgatat gtgaagcact tattgaacaa ggtgctagga caaatgagat tgacaatgat
2401 ggacgaatcc ctttcatatt agcttcacaa gagggtcatt atgattgtgt tcaaatatta
2461 ctggaaaaca aatccaacat tgatcaaaga ggttatgatg gaagaaatgc actgcgggtt
2521 gctgcattag aagggcacag ggacattgtt gaattgcttt ttagccatgg tgctgatgtt
2581 aactgcaaag atgctgatgg tcggcctaca ctttatatct tggccttaga aaatcagctt
2641 acaatggccg aatatttttt agaaaatggt gcaaacgtag aagcaagtga tgctgaagga
2701 aggacagcac ttcatgtgtc ttgttggcaa ggccatatgg aaatggtgca ggtcctgata
2761 gcataccatg ctgacgtcaa tgctgcagac aatgaaaagc gctctgcttt gcagtctgca
2821 gcctggcagg gccatgtaaa agtggttcag cttctgattg agcatggtgc tgtagttgac
2881 catacatgtg accaaggtgc aactgcactc tgtattgcag cccaggaagg gcacattgat
2941 gttgttcagg tcttattaga gcatggtgct gatccaaacc atgctgatca atttggacgc
3001 actgctatgc gtgttgcagc caaaaatgga cattctcaga taattaaatt attagaaaaa
3061 tatggtgcat ctagtttgaa tggctgttcc ccatctcctg ttcacacaat ggagcaaaaa
3121 cctctacagt cattgtcttc aaaagtgcag tcattaacaa ttaaatcaaa tagctctggt
3181 agtactggtg gaggggatat gcagccttcg ttacgtggtt tacctaatgg gcctactcat
3241 gcttttagtt ctccttcaga atctccagat tctacagttg accggcagaa gtcatcactg
3301 tcaaataatt ccctgaaaag ctcaaaaaat tcatctttga gaactacttc atctacagca
3361 acggctcaaa cagtgccaat tgatagcttt cataacttgt catttacaga acaaattcag
3421 cagcattcat tgccacgcag tagaagtcga cagtcaattg tttccccatc ttccacaaca
3481 cagtccttag gacagagtca taattcacca agtagtgaat ttgagtggag tcaagtaaag
3541 cccagtttga agtcaactaa agcaagtaaa ggggggaaat cagaaaattc tgccaagtct
3601 ggatcagctg ggaaaaaagc gaaacaaagt aattcttcac agccaaaggt tttagaatat
3661 gaaatgactc agtttgatag aagaggacct atagccaaat ccgggactgc tgcaccacct
3721 aaacaaatgc cagcagaatc tcaatgcaaa attatgatac cttcagctca gcaggaaatt
3781 ggtcgatctc aacagcagtt tcttattcac caacaaagtg gggaacagaa gaagagaaat
3841 ggaataatga caaatccaaa ttatcatctt cagagcaacc aggtttttct tggtagggtt
3901 tcagtcccac gaacaatgca agatagaggg catcaggaag tgttggaggg atacccttcc
3961 tcagagacag aattaagcct taaacaagct ctgaagcttc agattgaagg ttctgaccct
4021 agcttcaact ataaaaagga aacaccatta taaaagtttc ctattctgtg aaacagaaga
4081 cattgtgatg gagtggttct tcagctactg gatggaaaca tatgcctgtt gatttgctga
4141 aaaaacaaaa aaaatgaaga atgtgatctc tgcagtacag ttaccttaat tactgtaatg
4201 tgcctaaata gt
//