LOCUS AK295103 4334 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55320 complete cds, highly similar to
Sal-like protein 1.
ACCESSION AK295103
VERSION AK295103.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4334)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4334
/clone="BRAWH3041072"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489727"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 30..3896
/codon_start=1
/note="highly similar to Sal-like protein 1"
/protein_id="BAG58138.1"
/transl_table=1
/translation="MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHV
CGRCCAEFFELSDLLLHKKNCTKNQLVLIVNENPASPPETFSPSPPPDNPDEQMNDTV
NKSGSHSSTAPSSSSSSSSSSGGGGSSSTGTSAITTSLPQLGDLTTLGNFSVINSNVI
IENLQSTKVAVAQFSQEARCGGASGGKLAVPALMEQLLALQQQQIHQLQLIEQIRHQI
LLLASHNADLPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISG
VKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASHVSNPAV
SSSSSPAFAISSLLSPASNPLLPQQASANSVFPSPLPNIGTTAEDLNSLSALAQQRKS
KPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRF
STKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDT
KPVLPTLTTSVGLPLPPTLPSLIPFIKTEEPAPIPISHSATSPPGSVKSDSGGPESAT
RNLGGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTN
PLLPLMSEQFKAKFPFGGLLDSAQASETSKLQQLVENIDKKATDPNECIICHRVLSCQ
SALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFT
NAVVLQQHIRMHMGGQIPNTPVPDSYSESMESDTGSFDEKNFDDLDNFSDENMEDCPE
GSIPDTPKSADASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGS
IEGDVLTNDSSSVGGDMESQSAGSPAISESTSSMQALSPSNSTQEFHKSPSIEEKPQR
AVPSEFANGLSPTPVNGGALDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGK
TFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSN
LGPNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSPVLLP
ALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMG
THMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGSGDPSSFWNQYAAA
LSNGLAMKANEISVIQNGGIPPIPGSLGSGNSSPISGLTGNLERLQNSEPNAPLAGLE
KMASSENGTNFRFTRFVEDSKEIVTS"
BASE COUNT 1104 a 1287 c 988 g 955 t
ORIGIN
1 attctgcccc agctgatgtt tgagccagca tgtcgcggag gaagcaagcg aagcctcaac
61 atttccaatc cgaccccgaa gtggcctcgc tcccccggcg agatggagac acagaaaagg
121 gtcaaccgag tcgccctact aagagcaagg atgcccacgt ctgtggccgg tgctgtgccg
181 agttctttga attatcagat cttctgctcc acaagaagaa ctgtactaaa aatcaattag
241 ttttaatcgt aaatgaaaat ccagcctccc cacccgaaac cttctccccc agcccccctc
301 ctgataatcc tgatgaacaa atgaatgaca cagttaacaa aagcggcagc cacagcagta
361 ccgccccaag cagcagcagc agcagcagca gcagcagcgg cggcggcggc agctcctcca
421 caggtacctc agcgatcaca acctctctac ctcaactcgg ggacctgaca acactgggca
481 acttctccgt aatcaacagc aacgtcatca tcgagaacct ccagagcacc aaggtggcgg
541 tggcccagtt ctcccaggaa gcgaggtgcg gcggggcctc tgggggcaag ctggccgtcc
601 cagccctcat ggaacaactc ctagctctgc agcagcagca gatccaccag ctgcaattga
661 tcgaacagat tcgtcaccaa atattgctgt tggcttctca taatgcagac ttgccaacat
721 cttctagtcc ttctcaaggt actttacgaa catctgccaa ccccttgtcc acgctaagtt
781 cccatttatc tcagcagctg gcagcagcag ctggattggc acagagcctc gccagccaat
841 ctgccagcat tagtggtgtg aaacagctac ccccaatcca gctacctcag agcagttctg
901 gcaacaccat cattccatcc aacagcggct cttctcccaa tatgaacata ttggcagcgg
961 cagttaccac cccgtcctct gaaaaagtgg cttcaagtgc tggggcctcc catgtcagca
1021 acccagcggt ctcatcatcg tcctcaccag cttttgcaat aagcagttta ttaagtcctg
1081 cgtctaatcc acttctacct cagcaagcct ccgctaactc ggttttcccc agccctttgc
1141 ccaacatcgg aacaactgca gaggatttaa actccttgtc tgccttggcc cagcaaagaa
1201 aaagcaagcc accaaatgtc actgcctttg aagcgaaaag tacttccgat gaggcattct
1261 tcaaacacaa gtgcaggttc tgcgcgaagg tctttgggag tgacagtgcc ttgcagatcc
1321 acttgcgttc ccataccgga gagaggccat tcaagtgcaa catctgcggg aacaggttct
1381 ccaccaaggg gaatctgaaa gtccactttc agcgccacaa agagaaatac cctcatatcc
1441 agatgaaccc ctatcctgtg cctgagcatt tggacaatat ccccacgagt actggcatcc
1501 catatggcat gtccatccct ccagagaagc cagtcaccag ctggctagac accaaaccag
1561 tcctgcctac tctgaccact tcagtcggcc tgccgttgcc cccaaccctc ccaagcctca
1621 tacccttcat caagacggaa gagccagccc ccatccccat cagccattct gccaccagcc
1681 ccccaggctc agtcaaaagt gactccgggg gccctgagtc agccacaaga aacctaggtg
1741 ggctcccaga ggaagccgaa gggtccactc tgccaccctc tggtggcaaa agcgaagaga
1801 gtggcatggt caccaactca gtcccgacgg cgagcagtag cgtcctgagc tccccagcgg
1861 cagactgcgg ccccgcgggc agtgccacca ccttcaccaa ccctttgttg ccgctcatgt
1921 ccgagcagtt caaggccaag tttccttttg ggggactcct ggactcagct caggcatcag
1981 agacgtccaa gcttcagcaa ctggtagaaa acattgacaa gaaggccact gaccccaatg
2041 agtgcatcat ctgccaccgg gttctcagct gccagagcgc cttgaaaatg cactacagga
2101 cacacactgg ggagaggccc tttaagtgta agatctgtgg ccgggctttc accacgaaag
2161 ggaatcttaa aacccactac agtgtccatc gtgctatgcc cccgctcaga gtccagcatt
2221 cctgccccat ctgccagaag aagttcacga acgctgtggt cctgcagcag cacatccgaa
2281 tgcatatggg aggccagatc cccaacaccc cagtccccga cagctactct gagtccatgg
2341 agtctgacac aggttccttt gatgagaaaa attttgatga cctagacaac ttctctgatg
2401 aaaacatgga agactgtcct gagggcagca tccctgatac acctaagtct gcagacgcct
2461 cccaagacag cttatcctct tcgcctttgc ccctcgagat gtcgagcatc gctgctttgg
2521 aaaatcagat gaagatgatc aatgctggcc tggcagagca gctacaggcc agcctgaagt
2581 cagtggagaa tgggtccatc gagggggatg tcctgaccaa tgattcatcc tcagtgggtg
2641 gtgacatgga aagccaaagt gctggcagcc cagccatctc agagtctacc tcttccatgc
2701 aggctctgtc cccgtccaac agcacgcagg agttccacaa gtcacccagc attgaggaga
2761 aaccacagag agcggtccca agcgagtttg ccaatggttt gtctcccacc ccagtgaatg
2821 gtggggcttt ggatttgaca tctagtcacg cagagaaaat catcaaagaa gattctttgg
2881 ggatcctctt cccttttaga gaccggggta aatttaaaaa cactgcttgt gacatttgtg
2941 gcaaaacatt tgcttgtcag agtgccttgg acattcacta tagaagtcat accaaagaga
3001 gaccatttat ttgcacagtt tgcaatcgtg gcttttccac aaagggtaat ttgaagcagc
3061 acatgttgac acatcagatg cgagatctgc catcccagct ctttgagccc agttccaacc
3121 ttggccccaa tcagaactca gcggtgattc ccgccaactc gttgtcatct ctcatcaaga
3181 cagaggtcaa cggcttcgtg catgtttctc ctcaggacag taaggacacc cccaccagtc
3241 acgtcccgtc tgggcctctg tcttcctctg ccacatcccc agttctgctc cctgctctgc
3301 ccaggagaac tcccaagcag cactactgca acacatgtgg caaaaccttc tcctcatcga
3361 gtgccctgca gattcacgag agaactcaca ctggagagaa accctttgct tgcactattt
3421 gtggaagagc tttcacgact aaaggcaatc ttaaggtaca catgggcact cacatgtgga
3481 atagcacccc tgcacgacgg ggtcggcggc tctctgtgga tggccccatg acatttctag
3541 gaggcaatcc cgtcaagttc ccagaaatgt tccagaagga tttggcggca agatcaggaa
3601 gtggggatcc ttccagcttc tggaatcagt atgcagcagc gctctccaac gggctggcga
3661 tgaaggccaa cgagatctcc gtcattcaga acggtggcat ccctccaatt cctggaagcc
3721 tcggcagtgg gaacagctca cctattagtg ggctgacggg aaacctggag aggctccaga
3781 actcagagcc caatgctccc ctggccggcc tggagaaaat ggcaagcagt gagaacggaa
3841 ccaacttccg cttcacccgc ttcgtggagg acagcaagga gatcgtcacg agttaaagca
3901 gctcgggctg gagacatagc attcattcct gttcagaatg cgacctatgg tggcctccta
3961 ctccttgccc cccaccccgc cccgcccctt ccttctgttc cccagatcta tgaactacaa
4021 cattatgaag acattctttt gtaccttgtt caactttaga gttctaagaa agcttattta
4081 ttagcgatat aaccttgctt tgcaaacaga atgcaagcgt taactttggt cttctgtatt
4141 ttggactaaa tactaattga ctagagtgct gtaaacttgc tgtaacattt atggcaattg
4201 caagttgccc tgctaggcag ttgtaatctg gcattaactt attttctata tccagtttaa
4261 tatgaatctg gtgttgatgc aatgcctcag tgatgcatta gatctctaat aaagtctgta
4321 tatacatgta cact
//