LOCUS AK295087 2386 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61259 complete cds, highly similar to Cadherin-18 precursor. ACCESSION AK295087 VERSION AK295087.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2386) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2386 /clone="BRAWH3039460" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000489711" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 476..2200 /codon_start=1 /note="highly similar to Cadherin-18 precursor" /protein_id="BAG58128.1" /transl_table=1 /translation="MKITSTSCICPVLVCLCFVQRCYGTAHHSSIKVMRNQTKHIEGE TEVHHRPKRGWVWNQFFVLEEHMGPDPQYVGKLHSNSDKGDGSVKYILTGEGAGTIFI IDDTTGDIHSTKSLDREQKTHYVLHAQAIDRRTNKPLEPESEFIIKVQDINDNAPKFT DGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQPYFSVDPKTGVIR TALHNMDREAREHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLY VPESAQVGSAVGKIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKP LNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATMLKIIVGDVDEPPLFSMPSYLMEV YENAKIGTVVGTVLAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREE TPWYNITVTASEIDNPDLLSHVTVGIRVLDVNDNPPELAREYDIIVCENSKPGQVIHT ISATDKDDFANGPRFNFFLDERLPVNPNFTLKDNEAAAPSPSGFVHAREMGVCGPAMQ KPSCPRLV" BASE COUNT 717 a 524 c 534 g 611 t ORIGIN 1 gaggacggcg agcagctgtg cccagagctc tgggaaagtc ccctctcttt gcttcttata 61 aattaagttc ctttccacca gttagggcaa gtccgccaag atagactgaa gaggagcaag 121 aacagaaaca gggagccagt tacagatcta tcccaagaat tctggggaga gatgatggtg 181 tctgcagcag agtgacagca gtggagattg agagaaaagg ttgaaaatgg ttgcttgtgt 241 tcaactactg tgaagagttg gaatcagaca actacggctt tgattttcca agtggttcag 301 aatgtaaata tgatctgacc tttccctgat ggacagttaa atcatggaca cgctaaacaa 361 tttactttgg actgtccttc ctaaagatgc tctggcttct ctcttgaatg ctcactaagc 421 tttcgtagct gacaaggaaa ggaaggaaaa ctgtgaactg gaaagttatc ttacaatgaa 481 aattactagc acatcttgca tctgtccagt cctagtgtgt ctctgttttg tgcagaggtg 541 ttatggaact gctcaccaca gctccatcaa ggtgatgaga aaccaaacca aacacattga 601 aggtgaaacc gaagtccatc atcgtcccaa aaggggatgg gtatggaatc agttctttgt 661 tttagaagaa catatgggac cagatcctca gtatgttgga aagctgcact ccaattctga 721 caaaggtgat ggatctgtca agtacatcct tactggagag ggtgctggga ctatatttat 781 cattgacgat accacgggtg atatccactc aacaaaaagc ctagacagag agcagaagac 841 ccactatgtg cttcatgctc aagctattga tagacgtaca aacaaacctc ttgagcctga 901 atccgagttc atcatcaaag tgcaagacat caatgacaac gctccaaaat tcacagatgg 961 accatacatt gttactgtgc ctgaaatgtc agatatgggt acctctgttc tacaggtgac 1021 agctactgat gcagatgacc ctacctatgg aaacagcgct cgggtggttt acagcattct 1081 ccagggacaa ccctacttct ccgtcgaccc taaaacagga gttattagaa cggccttaca 1141 taacatggac agagaagcca gagaacatta ctccgtagtc attcaagcca aagacatggc 1201 tgggcaagtt ggagggcttt caggatctac aacagtcaac atcaccttaa ccgatgtcaa 1261 tgacaaccca ccacgctttc ctcaaaaaca ctatcagcta tatgttcctg agtcagctca 1321 agttggttca gctgttggga aaatcaaggc aaatgatgct gacactggct caaatgctga 1381 catgacctac tccatcataa atggtgatgg catgggaata ttctcaatct ccactgacaa 1441 agagaccaga gaaggaatcc tttctttaaa gaagccactg aactatgaga aaaagaagtc 1501 atataccctc aacatagaag gagcaaatac acatcttgat tttcgctttt ctcacttggg 1561 tccttttaaa gatgctacta tgctgaagat cattgttggg gatgtagatg aaccaccact 1621 attttccatg ccttcctacc tcatggaagt ctacgaaaat gccaagattg ggaccgtcgt 1681 tggtacagtt ttggcacaag atcctgacag tactaacagc ttagtaagat acttcatcaa 1741 ctacaatgtt gaagacgaca gatttttcaa cattgatgcc aatactggga ccattaggac 1801 tacaaaggtt ctcgacagag aagaaactcc atggtacaac atcacagtca ctgcttcaga 1861 aattgataat cctgatttgc tgagccatgt cacagtgggt attagagttc tggatgtcaa 1921 tgacaatcca cccgaacttg ccagggaata tgatattatt gtatgtgaaa attctaagcc 1981 tggccaggtt attcatacca tcagtgccac tgataaagat gattttgcca atggaccaag 2041 gtttaacttc tttcttgatg aacgcctgcc tgtaaatcca aacttcactc tgaaggacaa 2101 tgaagcagca gcaccctcac catcagggtt tgtgcatgcg agagagatgg gcgtgtgcgg 2161 acctgccatg cagaagcctt cctgtcctcg gctggtttga gtacaggagc cttaatcgct 2221 attcttctct gtgttctcat tctcctggca attgtggtac tttttatcac cctgaggcgc 2281 agcaaaaaag agcccttgat catttcagaa gaggatgtac gggagaacgt ggtcacctat 2341 gatgatgaag gaggcggaga ggaagacaca gaggcctttg acatca //