LOCUS AK295004 3346 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ55344 complete cds, highly similar to Dysferlin. ACCESSION AK295004 VERSION AK295004.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3346) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3346 /clone="BRAWH3031931" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000489628" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 191..3076 /codon_start=1 /note="highly similar to Dysferlin" /protein_id="BAH11947.1" /transl_table=1 /translation="MDDKSEDSMSVSTLSFGVNRPTISCIFDYGNRYHLRCYMYQARD LAAMDKDSFSDPYAIVSFLHQSQKTVVVKNTLNPTWDQTLIFYEIEIFGEPATVAEQP PSIVVELYDHDTYGADEFMGRCICQPSLERMPRLAWFPLTRGSQPSGELLASFELIQR EKPAIHHIPGFEVQETSRILDESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEIL AWGLRNMKSYQLANISSPSLVVECGGQTVQSCVIRNLRKNPNFDICTLFMEVMLPREE LYCPPITVKVIDNRQFGRRPVVGQCTIRSLESFLCDPYSAESPSPQGGPDDVSLLSPG EDVLIDIDDKEPLIPIQEEEFIDWWSKFFASIGEREKCGSYLEKDFDTLKVYDTQLEN VEAFEGLSDFCNTFKLYRGKTQEETEDPSVIGEFKGLFKIYPLPEDPAIPMPPRQFHQ LAAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKISIGKKSVSDQDNYIPCTLEPVF GKMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETVVDLENRLLSKFGARCGLPQTYC VSGPNQWRDQLRPSQLLHLFCQQHRVKAPVYRTDRVMFQDKEYSIEEIEAGRIPNPHL GPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMWVDLFPKALGRPGPPF NITPRRARRFFLRCIIWNTRDVILDDLSLTGEKMSDIYVKGWMIGFEEHKQKTDVHYR SLGGEGNFNWRFIFPFDYLPAEQVCTIAKKDAFWRLDKTESKIPARVVFQIWDNDKFS FDDFLGSLQLDLNRMPKPAKTAKKCSLDQLDDAFHPEWFVSLFEQKTVKGWWPCVAEE GEKKILAGKLEMTLEIVAESEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYK TMKFILWRRFRWAIILFIILFILLLFLAIFIYAFPNYAAMKLVKPFS" BASE COUNT 770 a 961 c 912 g 703 t ORIGIN 1 agctccagat ggtccagacg gtgaccagag cagtagggag ccagtatgag ttgttgacaa 61 gaagagtgct ctggtcagag ctaggcttta ggaccatcag tcaagcagcc atggaggatg 121 cttgggaggc agagcctccc atcaggaaac cccaggagtc ttgtgtagag atccaggaga 181 gggcggcgtg atggatgaca agagtgaaga ttccatgtcc gtctccacct tgagcttcgg 241 tgtgaacaga cccacgattt cctgcatatt cgactatggg aaccgctacc atctacgctg 301 ctacatgtac caggcccggg acctggctgc gatggacaag gactcttttt ctgatcccta 361 tgccatcgtc tccttcctgc accagagcca gaagacggtg gtggtgaaga acacccttaa 421 ccccacctgg gaccagacgc tcatcttcta cgagatcgag atctttggcg agccggccac 481 agttgctgag caaccgccca gcattgtggt ggagctgtac gaccatgaca cttatggtgc 541 agacgagttt atgggtcgct gcatctgtca accgagtctg gaacggatgc cacggctggc 601 ctggttccca ctgacgaggg gcagccagcc gtcgggggag ctgctggcct cttttgagct 661 catccagaga gagaagccgg ccatccacca tattcctggt tttgaggtgc aggagacatc 721 aaggatcctg gatgagtctg aggacacaga cctgccctac ccaccacccc agagggaggc 781 caacatctac atggttcctc agaacatcaa gccagcgctc cagcgtaccg ccatcgagat 841 cctggcatgg ggcctgcgga acatgaagag ttaccagctg gccaacatct cctcccccag 901 cctcgtggta gagtgtgggg gccagacggt gcagtcctgt gtcatcagga acctccggaa 961 gaaccccaac tttgacatct gcaccctctt catggaagtg atgctgccca gggaggagct 1021 ctactgcccc cccatcaccg tcaaggtcat cgataaccgc cagtttggcc gccggcctgt 1081 ggtgggccag tgtaccatcc gctccctgga gagcttcctg tgtgacccct actcggcgga 1141 gagtccatcc ccacagggtg gcccagacga tgtgagccta ctcagtcctg gggaagacgt 1201 gctcatcgac attgatgaca aggagcccct catccccatc caggaggaag agttcatcga 1261 ttggtggagc aaattctttg cctccatagg ggagagggaa aaatgcggct cctacctgga 1321 gaaggatttt gacaccctga aggtctatga cacacagctg gagaatgtgg aggcctttga 1381 gggcctgtct gacttttgta acaccttcaa gctgtaccgg ggcaagacgc aggaggagac 1441 agaagatcca tctgtgattg gtgaatttaa gggcctcttc aaaatttatc ccctcccaga 1501 agacccagcc atccccatgc ccccaagaca gttccaccag ctggccgccc aggggcccca 1561 ggagtgcttg gtccgtatct acattgtccg agcatttggc ctgcagccca aggaccccaa 1621 tggaaagtgt gatccttaca tcaagatctc catagggaag aaatcagtga gtgaccagga 1681 taactacatc ccctgcacgc tggagcccgt atttggaaag atgttcgagc tgacctgcac 1741 tctgcctctg gagaaggacc taaagatcac tctctatgac tatgacctcc tctccaagga 1801 cgaaaagatc ggtgagacgg tcgtcgacct ggagaacagg ctgctgtcca agtttggggc 1861 tcgctgtgga ctcccacaga cctactgtgt ctctggaccg aaccagtggc gggaccagct 1921 ccgcccctcc cagctcctcc acctcttctg ccagcagcat agagtcaagg cacctgtgta 1981 ccggacagac cgtgtaatgt ttcaggataa agaatattcc attgaagaga tagaggctgg 2041 caggatccca aacccacacc tgggcccagt ggaggagcgt ctggctctgc atgtgcttca 2101 gcagcagggc ctggtcccgg agcacgtgga gtcacggccc ctctacagcc ccctgcagcc 2161 agacatcgag caggggaagc tgcagatgtg ggtcgaccta tttccgaagg ccctggggcg 2221 gcctggacct cccttcaaca tcaccccacg gagagccaga aggtttttcc tgcgttgtat 2281 tatctggaat accagagatg tgatcctgga tgacctgagc ctcacggggg agaagatgag 2341 cgacatttat gtgaaaggtt ggatgattgg ctttgaagaa cacaagcaaa agacagacgt 2401 gcattatcgt tccctgggag gtgaaggcaa cttcaactgg aggttcattt tccccttcga 2461 ctacctgcca gctgagcaag tctgtaccat tgccaagaag gatgccttct ggaggctgga 2521 caagactgag agcaaaatcc cagcacgagt ggtgttccag atctgggaca atgacaagtt 2581 ctcctttgat gattttctgg gctccctgca gctcgatctc aaccgcatgc ccaagccagc 2641 caagacagcc aagaagtgct ccttggacca gctggatgat gctttccacc ccgaatggtt 2701 tgtgtccctt tttgagcaga aaacagtgaa gggctggtgg ccctgtgtag cagaagaggg 2761 tgagaagaaa atactggcgg gcaagctgga aatgaccttg gagattgtag cagagagtga 2821 gcatgaggag cggcctgctg gccagggccg ggatgagccc aacatgaacc ctaagcttga 2881 ggacccaagg cgccccgaca cctccttcct gtggtttacc tccccataca agaccatgaa 2941 gttcatcctg tggcggcgtt tccggtgggc catcatcctc ttcatcatcc tcttcatcct 3001 gctgctgttc ctggccatct tcatctacgc cttcccgaac tatgctgcca tgaagctggt 3061 gaagcccttc agctgaggac tctcctgccc tgtagaaggg gccgtggggt cccctccagc 3121 atgggactgg cctgcctcct ccgcccagct cggcgagctc ctccagacct cctaggcctg 3181 attgtcctgc cagggtgggc agacagacag atggaccggc ccacactccc agagttgcta 3241 acatggagct ctgagatcac cccacttcca tcatttcctt ctcccccaac ccaacgcttt 3301 tttggatcag ctcagacata tttcagtata aaacagttgg aaccac //