LOCUS AK294998 2830 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59020 complete cds, highly similar to WD
repeat protein 47.
ACCESSION AK294998
VERSION AK294998.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2830)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2830
/clone="BRAWH3031474"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489622"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 73..2526
/codon_start=1
/note="highly similar to WD repeat protein 47"
/protein_id="BAG58062.1"
/transl_table=1
/translation="MSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCLLLTLP
RLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGL
LYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPSSVFSCAF
EQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALD
GLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLMLENTECHSIYEESPE
RDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNELRDSTEQFQEYYRQRL
RYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSIQKLGELNIGMDG
LGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTN
HIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQA
VRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHHKGSIYC
VAWSPCGQLLATGSNDKYVKVLPFNAETCNATDLEFSMHDGTIRDLAFMEGPESGGAI
LISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLR
VPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHS
SDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQD
LSFLSSSADRTVTLWTYNG"
BASE COUNT 828 a 576 c 642 g 784 t
ORIGIN
1 tttgacaaaa aaaggtttcg ttatattatc ctgaagcaga agtttttaga agctttatgt
61 gttaacaacg cgatgtcagc agaagatgag ccccagcatc tggaatttac catgcaagaa
121 gctgtgcaat gtttacatgc tctagaagaa tactgtcctt ctaaagatga ctatagtaag
181 ctctgtttgc ttttgacttt gcctcgtctg accaatcatg ccgagtttaa ggactggaat
241 cccagcaccg cacgagttca ctgttttgaa gaggcttgtg tcatggttgc agaattcatc
301 cctgctgata ggaagctaag tgaagctggt tttaaggcta gtaacaatcg tttatttcag
361 cttgtaatga aaggcctgct ttatgaatgc tgtgtagaat tttgtcagag taaagcaact
421 ggagaagaaa ttacagaaag cgaagtgctt cttggcatcg acctcttatg tggtaatggt
481 tgtgatgatt tggatctgag tttactgtca tggcttcaga atcttccatc ttctgtcttc
541 tcttgtgctt ttgaacagaa aatgcttaat attcatgttg acaaacttct gaaacctaca
601 aaagctgcat atgctgatct tttgactcct cttatcagca aactctctcc ctatccatca
661 tccccaatga gaagacctca atcagctgat gcctatatga cccgctctct gaatcctgct
721 ttagatggcc tcacctgtgg actaaccagt catgataaga gaatttcaga ccttggaaac
781 aaaacttctc caatgtcaca ctcctttgct aacttccatt atccaggggt acaaaacctc
841 agtagaagtc tcatgcttga gaatacagaa tgtcacagta tttacgaaga atcccctgag
901 cgtgatacac ctgttgatgc acagaggcct atcggcagtg aaatcttggg ccagagttca
961 gtttcagaaa aagagcctgc aaatggagca cagaatccag gaccagctaa acaagaaaaa
1021 aatgagcttc gagattcaac agaacaattt caagaatatt ataggcaaag attacgctat
1081 caacagcatt tagaacagaa ggagcaacag cggcagatat accaacagat gttgcttgaa
1141 ggaggcgtga atcaggagga tggtcctgat cagcagcaga atcttactga acagttcctt
1201 aataggtcca ttcaaaagct tggtgaatta aatattggaa tggatggcct tggtaatgag
1261 gtatcagcac tcaaccagca atgtaatggg agcaaaggca atggatctaa tggttcttct
1321 gtgactagtt ttactacacc accccaagac tctagtcaga gattaacaca tgatgcttca
1381 aatattcata caagcactcc tcgtaatcct ggatcaacaa atcacatacc ttttctggag
1441 gaatcacctt gtggaagcca aatctcttca gaacattcgg tcattaagcc acctcttgga
1501 gattctccag ggagtctttc aaggtcgaaa ggggaagagg atgacaaatc aaaaaagcag
1561 tttgtttgta ttaatatcct agaagacaca caagctgtta gagcagtggc ttttcatcca
1621 gctggaggtt tatatgctgt tggttcaaat tcaaaaactc tgagagtatg tgcctatcca
1681 gatgtaattg atccaagtgc acatgagact cctaagcagc cggtggtacg ttttaaaagg
1741 aataaacatc ataaaggatc catttactgt gtggcctgga gtccttgtgg gcagttatta
1801 gcaacaggat caaatgacaa atacgtcaaa gtgctgccct tcaatgcaga gacttgtaac
1861 gcaacagatc tggaatttag tatgcatgat ggaacaatta gagacttggc atttatggaa
1921 ggcccagaaa gcggaggagc tattttaata agtgctggag caggggattg taacatttat
1981 acaaccgatt gtcaaagagg acagggcctc catgctttga gtggacatac tgggcatatt
2041 ttagcacttt atacctggag tggctggatg attgcatctg gttcccaaga taagactgtt
2101 agattttggg atcttcgagt accaagttgt gttcgtgttg ttggcacaac atttcatgga
2161 actggcagtg cagtggcatc tgtagctgta gatcccagtg gtcgtctctt agccacaggt
2221 caagaagatt ctagctgcat gttgtatgac ataagaggag gaagaatggt acaaagttat
2281 catcctcatt ccagtgatgt tcgctctgtt cgattctccc ctggagctca ctacttgcta
2341 acaggctctt atgatatgaa aataaaggtg acagacctac aaggggacct caccaagcag
2401 cttcctatca tggtggtggg ggagcacaag gacaaagtga ttcagtgcag atggcacacc
2461 caggatcttt ccttcctgtc atcctctgca gatagaactg tcaccctctg gacttacaat
2521 gggtagagca caccgcatgt cagtctatgc agcaaaagca cagagactta agactactga
2581 gttgtgaaaa ttacaaatct gaagaacata gtgtccagga aagtggttta gcacgaagag
2641 gccccttatt accatgtatc ccactgatag gaggtgttgg gtggtgttat tccgcagtgc
2701 tttcagtctt ccatgtgagc tcgtgctgct gtgacctgct atatgtagtc tcgttgccaa
2761 agtctgcaga agagctcttc agttgttggt gtgcactcca agtcaggatg gacaatgtgt
2821 ttacggttta
//