LOCUS AK294979 2962 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56020 complete cds, highly similar to Homo
sapiens coiled-coil domain containing 14 (CCDC14), mRNA.
ACCESSION AK294979
VERSION AK294979.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2962)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2962
/clone="BRAWH3028877"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489603"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 88..2805
/codon_start=1
/note="highly similar to Homo sapiens coiled-coil domain
containing 14 (CCDC14), mRNA"
/protein_id="BAH11939.1"
/transl_table=1
/translation="MVRSGARPGQVLSSGRHTGPAKLTNGKKATYLRKIPRFNADSGY
SIHSDSESQAETVHGLDGCASLLRDILRNEDSGSETAYLENRSNSRPLESKRYGSKKK
RHEEHTIPLVVQKETSSSDNKKQIPNEASARSERDTSDLEQNWSLQDHYRMYSPIIYQ
ALCEHVQTQMSLMNDLTSKNIPNGIPAVPCHAPSHSESQATPHSSYGLCTSTPVWSLQ
RPPCPPKVHSEVQTDGNSQFASQGKTVSATCTDVLRNSFNTSPGVPCSLPKTDISAIP
TLQQLGLVNGILPQQGIHKETDLLKCIQTYLSLFRSHGKEPHLDSQTHRSPTQSQPAF
LATNEEKCAREQIREATSERKDLNIHVRDTKTVKDVQKAKNVNKTAEKVRIIKYLLGE
LKALVAEQEDSEIQRLITEMEACISVLPTVSGNTDIQVEIALAMQPLRSENAQLRRQL
RILNQQLREQQKTQKPSGAVDCNLELFSLQSLNMSLQNQLEESLKSQELLQSKNEELL
KVIENQKDENKKFSSIFKDKDQTILENKQQYDIEITRIKIELEEALVNVKSSQFKLET
AEKENQILGITLRQRDAEVTRLRELTRTLQTSMAKLLSDLSVDSARCKPGNNLTKSLL
NIHDKQLQHDPAPAHTSIMSYLNKLETNYSFTHSEPLSTIKNEETIEPDKTYENVLSS
RGPQNSNTRGMEEASAPGIISALSKQDSDEGSETMALIEDEHNLDNTIYIPFARSTPE
KKSPLSKRLSPQPQIRAATTQLVSNSGLAVSGKENKLCTPVICSSSTKEAEDAPEKLS
RASDMKDTQLLKKIKEAIGKIPAATKEPEEQTACHGPSGCLSNSLQVKGNTVCDGSVF
TSDLMSDWSISSFSTFTSRDEQDFRNGLAALDANIARLQKSLRTGLLEK"
BASE COUNT 1018 a 590 c 598 g 756 t
ORIGIN
1 aagaaggtcc gggagcccac ggcggttaat tctttttacc gtgaggcttc acttccctcg
61 gtctgggctt ctctgaggcg gcgagagatg gtcaggtctg gagctcgacc gggccaggtg
121 ttatcttcag gaaggcacac tggacctgct aaattaacaa atggaaagaa agcgacctat
181 ttaagaaaaa taccacgttt taatgcagat tctggctatt ccatccattc tgattcagaa
241 agtcaggctg aaactgtaca cgggcttgat ggttgtgctt ctttgctgag ggacattttg
301 agaaatgaag attcaggttc agaaacagca tatttagaaa acagatctaa ttctagacct
361 ttagaaagca aaagatacgg atcaaaaaag aaaagacatg aagaacatac tattcctttg
421 gtagtccaga aagaaacatc atcttcagat aataagaaac agatacctaa tgaagcttct
481 gctagaagtg aaagagacac atcagaccta gagcaaaact ggtcattgca agatcattat
541 agaatgtatt cacccataat ataccaagcc ctctgtgagc acgtgcagac tcagatgtca
601 ctgatgaatg acttgacttc aaagaacatc cctaatggaa ttcctgctgt accatgccat
661 gctccctctc attctgaatc tcaggcaact cctcattcta gttatggctt atgtacctcc
721 accccagtct ggtcacttca gcggccaccc tgccctccaa aggttcattc tgaagttcaa
781 actgatggca acagtcagtt tgcatcacaa ggtaaaacag tttctgcaac ctgtactgat
841 gttctacgga attcatttaa taccagtcct ggagttccat gtagcctgcc caaaactgac
901 atatcagcta ttccaacatt gcagcaactg ggccttgtta atggaattct gccacaacaa
961 ggaattcata aggaaacaga cctactaaaa tgtattcaaa catatttgtc tctttttcga
1021 tctcatggaa aagaaccgca tctggacagt cagacacacc gaagccctac tcagtcacaa
1081 ccagctttct tggccactaa tgaagaaaaa tgtgccagag agcaaattag agaggccaca
1141 agtgaaagaa aggatttaaa catacatgtg cgagatacaa aaacagtgaa ggatgtacag
1201 aaggcaaaaa atgtgaacaa gacagctgaa aaagttagaa ttataaaata tttgttggga
1261 gagctcaagg ccctggtagc agaacaagag gattcagaaa ttcagaggtt gattacagaa
1321 atggaggcat gtatatctgt acttccaaca gtaagtggaa acacagatat tcaagttgag
1381 atagcactgg ccatgcaacc attaagaagt gagaatgctc agttacgaag gcagttgaga
1441 attttgaacc agcaactcag agaacaacag aaaactcaaa aaccatctgg tgctgtggat
1501 tgcaaccttg aattgttttc tcttcagtca ttgaatatgt cactgcaaaa tcaattggag
1561 gagtcactaa agagccagga attactgcag agtaaaaatg aagagctgtt aaaagtgatt
1621 gaaaatcaga aagatgaaaa caaaaaattt agtagtatat ttaaagacaa agatcaaact
1681 atacttgaaa ataaacagca atatgatatt gagataacaa gaataaaaat tgaattggag
1741 gaagccctag tcaatgtgaa aagctcccag tttaagttag aaactgctga aaaggaaaac
1801 cagatattgg ggataacatt acgtcagcgt gatgctgagg tgactcgact aagagaatta
1861 accagaactt tacagactag catggcaaag cttctctccg atcttagtgt ggacagtgct
1921 cgctgcaagc ctgggaataa ccttaccaaa tcactcttga acattcatga taaacaactt
1981 caacatgacc cagctcctgc tcacacttcc ataatgagct atctaaataa gttagaaaca
2041 aattacagtt ttacacattc agagccactt tctacaatta aaaatgagga aaccatagag
2101 ccagacaaaa cctatgaaaa tgttctgtcc tccagaggcc ctcaaaatag taacactagg
2161 ggcatggagg aagcatctgc acctggaatt atttctgccc tttcaaaaca ggattctgat
2221 gaagggagtg aaactatggc tttaatagaa gatgagcata atttggataa tacaatttac
2281 attccttttg ctagaagcac tcctgaaaag aaatcaccac tttctaagag actatcccct
2341 cagccacaaa taagagcagc tacaacacag ctagtcagca acagtggact tgctgtctct
2401 ggaaaagaaa ataaactgtg tacacctgta atctgttcct cttcaacaaa ggaagcagaa
2461 gatgcacctg aaaaactttc cagagcatct gatatgaagg acacacagct cctcaagaaa
2521 ataaaggaag caattggtaa gatccctgct gccaccaagg agccagagga acaaactgca
2581 tgtcatggcc catcaggttg tcttagcaac agccttcaag tgaaaggcaa tactgtctgt
2641 gatggtagtg ttttcacttc tgacttgatg tctgactgga gcatctcttc gttttcaacg
2701 ttcacttctc gtgatgaaca agacttcaga aatggccttg cggcattaga tgccaacata
2761 gctagactcc agaagtcttt aaggactggt cttctggaga aatgaattca gaagaaaatt
2821 catcaggtgc ttctttttaa aactagaact tggctatatt gaatgtgtat ttttctttag
2881 tgaaatgatg ttttatgtta ttatgtgtga agtaatatat tgtacaagta ataaatgtat
2941 tgttgagata tattgacact ga
//