LOCUS AK294971 4013 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54437 partial cds, highly similar to RRP5 protein homolog. ACCESSION AK294971 VERSION AK294971.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4013) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4013 /clone="BRAWH3028610" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000489595" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 117..>4013 /codon_start=1 /note="highly similar to RRP5 protein homolog" /protein_id="BAG58043.1" /transl_table=1 /translation="MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGPTKR KKSQKGPAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISL PNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITD RGKKSVKLSLNPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGARAFLPLL KAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLN NLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCV HPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLA YARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDI EPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVL LCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIRVKDYGCIVKFYNNVQ GLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSCDPEPKKEPSG HSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHHW LQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDPKNFSEIHPGMLLIGFVKSIK DYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLR LSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAEMTPGMFLDLVVQEV LEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVDLLKLEVHVSLHQDL VNRKARKLRKGSEHQAIVQHLEKSLAIASLVETGHLAAFSLTSHLNDTFRFDSEKLQV GQGVSLTLKTTEPGVTGLLLAVEGPAAKGTMRPTQKDSETVDEDEEVDPALTVGTIKK HTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGKTV TARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPMEKIKQY QAGLSEEDDSLVDVYYREGKEEAEETNVLPKEKQTKPAEAPRLQLSSGFAWNVGLDSL TPALPPLAESSDSEEDEKPHQATQIKKSKKALYNKHLPEGKLLTARVLRLNHQKNLVE LSFLPGDTGKPDVLSASLEGQLTKQEERKTEAEERDQ" BASE COUNT 1058 a 979 c 1106 g 870 t ORIGIN 1 acacttccgg aagaattgca ctggactgtg ggtatcctgg tctccgcgtg tgtgagtacc 61 gcggcgcgag gttagtggta gctgggtgca gacgccgtgg cgctggagac ccaaacatgg 121 caaacctgga agaaagcttc ccccgaggag gtacaagaaa gatccacaaa ccagagaaag 181 ctttccagca gtcagttgaa caagacaact tatttgatat ttctactgaa gagggaccca 241 ccaaaagaaa aaagagccag aaggggccag caaaaacaaa aaagttgaaa atcgaaaaga 301 gagaaagcag caagtccgca agagagaagt ttgaaatcct tagtgttgag tccctgtgtg 361 agggaatgcg tattttgggt tgcgtgaaag aggtgaatga actggaactg gtgattagtc 421 tccccaatgg cctccagggc tttgtgcaag tcactgaaat ctgtgatgcc tacaccaaaa 481 agctgaatga gcaggtgaca caagaacaac ctctgaagga cctacttcac ttgcctgaac 541 ttttctcacc tggaatgctg gtaagatgtg tggtgagcag tctgggcatc acagacaggg 601 gcaagaagag tgtcaagctg tctctgaacc ccaaaaatgt caacagagtg ctgagtgctg 661 aggccctgaa gcctggcatg ctacttacag gtaccgtatc cagcctggaa gaccatggct 721 acctagtgga cattggtgtt gatggggcca gagcttttct gccactgctg aaagcccagg 781 agtacatcag acagaagaac aaaggtgcta aactaaaggt gggtcagtac ctgaactgca 841 ttgttgaaaa ggtgaaaggc aacggaggag ttgttagtct gtctgttggt cactcagagg 901 tttctacggc cattgctact gaacagcaga gctggaacct taataacttg ctaccaggac 961 tggtggtcaa agctcaggta cagaaggtga ctccatttgg ccttacgcta aacttcctca 1021 cattcttcac gggcgtggtt gactttatgc acctggatcc caagaaagct ggaacatatt 1081 tctcaaatca ggcagtgagg gcctgcatcc tttgcgtcca tcctcgaacc agagttgtgc 1141 acctgagcct gcgccccatc ttcctacagc ctggacgccc actcacccga ctctcttgcc 1201 agaaccttgg agcagtgctg gatgatgttc ctgtccaggg ttttttcaaa aaggctgggg 1261 ccacctttag gctgaaggat ggggttctgg cctatgcccg gctcagccat ctctctgatt 1321 ctaagaacgt cttcaatcct gaggccttca agccagggaa cactcacaag tgtagaatta 1381 ttgactacag ccaaatggat gaactggcct tgctctctct acgaacgtct attattgaag 1441 ctcagtacct tagatatcat gacatcgaac ctggggcagt ggtaaagggc acagtgctaa 1501 ccataaagtc atatgggatg ctggtgaagg tgggcgagca gatgaggggc ctggtacctc 1561 ccatgcacct ggctgacatc ctgatgaaga atccggagaa gaagtaccac atcggggatg 1621 aggtcaagtg ccgggttttg ctttgtgacc ctgaagccaa gaagctgatg atgaccctga 1681 aaaaaaccct gattgagtcc aaactacctg tcattacctg ctatgccgat gccaagcctg 1741 gtctgcagac acatggcttc atcatcaggg tcaaggacta tggctgcatt gtgaagttct 1801 acaacaatgt gcagggactg gtgcccaagc atgagctcag tactgagtat atccctgacc 1861 cggagagagt tttttacact ggccaggtgg tgaaggttgt cgtattgaac tgtgagccat 1921 ccaaagagag gatgctctta tccttcaagc tgtcgtgtga tccagagcca aagaaagagc 1981 cttcaggaca cagtcagaag aaaggaaaag ccattaacat tgggcagttg gtagatgtga 2041 aggttttaga gaagaccaaa gatgggctgg aggtggctgt cctgccccac aacatccgtg 2101 ctttcctccc cacatctcat ctgtcggacc acgttgccaa cggcccattg ttacatcatt 2161 ggctccaggc aggtgacatc cttcaccgag tcctgtgtct gagccagagc gaggggcgtg 2221 ttcttctttg caggaagcca gccttggtct ccacagtaga aggtggccag gatcccaaga 2281 acttctcaga aatccatcct ggaatgctgc tcattggttt tgtgaagagc atcaaggact 2341 atggcgtgtt catccagttc ccctcaggtc ttagcggact ggccccaaaa gctatcatga 2401 gtgacaaatt tgtgacctcc acaagtgacc actttgttga gggccagaca gtagcggcaa 2461 aggtgaccaa tgtggatgag gagaagcagc ggatgctgct gtcactgcgg ctgtcggact 2521 gtggtctggg ggacttggct atcaccagcc tcctcctcct gaatcagtgc ctggaggagc 2581 tgcagggcgt gcgcagcctt atgagcaacc gagactctgt gttgatccag acgctggccg 2641 agatgacccc aggaatgttc cttgacctag tggtgcagga ggtgttggaa gatggctctg 2701 tggtattcag tgggggtcca gtgcccgacc tggtcctgaa agccagcaga taccatcgcg 2761 cagggcagga ggtggaatct gggcagaaaa agaaggttgt tatcttaaat gttgatcttt 2821 tgaagttgga agtgcacgtt tcccttcacc aggacttggt gaatagaaaa gctagaaagc 2881 tgaggaaagg cagcgaacac caggcgattg tgcagcactt ggagaagtcc cttgccattg 2941 cctccttggt agagacgggc cacctggcag ctttctccct gacctctcac ctcaacgaca 3001 ccttccgctt tgactcagag aaattgcagg tgggacaggg tgtctcccta accctcaaga 3061 ccacagaacc aggagtgact ggccttcttt tggctgtgga ggggccggct gccaagggga 3121 ccatgaggcc gacccagaag gactctgaga cagttgatga ggatgaagaa gtggatccag 3181 ctctgactgt agggaccata aagaagcaca ccctctccat cggggacatg gtcacaggga 3241 ctgtcaagtc cattaagcct acccatgtgg ttgtgactct ggaagatggc attattggct 3301 gtatccatgc ctcccacatt ctagatgatg ttccagaggg cacctctcct actaccaagc 3361 tgaaggttgg gaagacggtc actgcccgag tgattggcgg gcgagacatg aagacattca 3421 agtatctccc aataagtcac cccagattcg ttcgaaccat cccggagctg agtgttcggc 3481 caagtgagct ggaggatggc cacactgctc ttaacactca ctctgttagc cccatggaga 3541 agattaaaca gtaccaagcc ggcctgtcag aggaggacga cagccttgtg gacgtgtact 3601 atcgggaggg aaaagaggag gcagaagaga cgaatgtgct gcccaaggag aagcaaacca 3661 agccagcaga agcgccccgg ctgcagctgt cttcaggctt cgcttggaat gtgggactag 3721 actctctgac cccggccttg ccacctctag cagagagctc agacagcgag gaggatgaga 3781 agccacacca agccacgcag ataaagaaaa gcaagaaagc cctttataac aaacacctcc 3841 ctgaagggaa gctgctcaca gccagggtcc tacgccttaa ccaccagaag aacctggtag 3901 agctgtcttt cctccccgga gacactggga agccagacgt gctttctgct tccttggaag 3961 ggcaacttac aaagcaagag gagaggaaaa cagaggctga ggagagagac caa //