LOCUS AK294970 3027 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61250 complete cds, highly similar to Homo
sapiens GTPase activating Rap/RanGAP domain-like 3 (GARNL3), mRNA.
ACCESSION AK294970
VERSION AK294970.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3027)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3027
/clone="BRAWH3028408"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489594"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 411..2945
/codon_start=1
/note="highly similar to Homo sapiens GTPase activating
Rap/RanGAP domain-like 3 (GARNL3), mRNA"
/protein_id="BAG58042.1"
/transl_table=1
/translation="MNLDKFEKGPREIFHPEIQKDLLVLEEQEGSVNFKFGVLFAKDG
QLTDDEMFSNEIGSEPFQKFLNLLGDTITLKGWTGYRGGLDTKNDTTGIHSVYTVYQG
HEIMFHVSTMLPYSKENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHI
FALVRYNQQNDNYRLKIFSEESVPLFGPPLPTPPVFTDHQEFRDFLLVKLINGEKATL
ETPTFAQKRRRTLDMLIRSLHQDLMPDLHKNMLNRRSFSDVLPESPKSARKKEEARQA
EFVRIGQALKLKSIVRGDAPSSLAASGICKKEPWEPQCFCSNFPHEAVCADPWGQALL
VSTDAGVLLVDDDLPSVPVFDRTLPVKQMHVLETLDLLVLRADKGKDARLFVFRLSAL
QKGLEGKQAGKSRSDCRENKLEKTKGCHLYAINTHHSRELRIVVAIRNKLLLITRKHN
KPSGVTSTSLLSPLSESPVEEFQYIREICLSDSPMVMTLVDGPAEESDNLICVAYRHQ
FDVVNESTGEAFRLHHVEANRVNFVAAIDVYEDGEAGLLLCYNYSCIYKKVCPFNGGS
FLVQPSASDFQFCWNQAPYAIVCAFPYLLAFTTDSMEIRLVVNGNLVHTAVVPQLQLV
ASRSDIYFTATAAVNEVSSGGSSKGASARNSPQTPPGRDTPVFPSSLGEGEIQSKNLY
KIPLRNLVGRSIERPLKSPLVSKVITPPTPISVGLAAIPVTHSLSLSRMEIKEIASRT
RRELLGLSDEGGPKSEGAPKAKSKPRKRLEESQGGPKPGAVRSSSSDRIPSGSLESAS
TSEANPEGHSASSDQDPVADREGSPVSGSSPFQLTAFSDEDIIDLK"
BASE COUNT 819 a 727 c 734 g 747 t
ORIGIN
1 gtagacgtgg ggatttcagt aggaaacatt atggatctgt ggggctgctt atttccagtg
61 atgctgatgg agccatccaa agggctggaa gattcagagt ggaaaatggc tcttcagatg
121 agaatgcaac tgccctgcct ggtacttggc gaagaacaga cgtgcactta gagaacccag
181 aataccacac cagatggtat ttcaaatatt ttttaggaca agtccatcag aactacattg
241 gaaacgatgc cgagaagagc cctttcttct tgtccgtgac cctttctgac caaaacaatc
301 aacgtgtccc tcaataccgt tcaattcttt ggagaaaaac aggtacccag aaaatatgcc
361 ttccctacag tcccacaaaa actctttctg tgaagtccat cttaagtgcc atgaatctgg
421 acaaatttga gaaaggcccc agggaaattt ttcatcctga aatacaaaag gacttgctgg
481 ttcttgaaga acaagagggc tctgtgaatt tcaagtttgg ggttcttttt gccaaagatg
541 ggcagctcac tgatgatgag atgttcagca atgaaattgg aagcgagcct tttcaaaaat
601 ttttaaatct tctgggtgac acaatcactc taaagggctg gacgggctac cgtggcggtc
661 tggataccaa aaatgatacc acagggatac attcagttta tactgtgtac caagggcatg
721 agatcatgtt tcatgtttcc accatgttgc catattccaa agagaacaaa cagcaggtgg
781 aaaggaagcg ccacattgga aacgatatcg tcaccattgt gttccaagaa ggagaggaat
841 cttctcctgc ctttaagcct tccatgatcc gctcccactt tacacatatt tttgccttag
901 tgagatacaa tcaacaaaat gacaattaca ggctgaaaat attttcagaa gagagcgtac
961 cactctttgg ccctcccttg ccaactccac cagtgtttac agaccaccag gaattcaggg
1021 actttttgct agtgaaatta attaatggtg aaaaagccac tttggaaacc ccaacatttg
1081 cccagaaacg tcggcgtacc ctggatatgt tgattagatc tttacaccag gatttgatgc
1141 cagatttgca taagaacatg cttaatagac gatcttttag tgatgtctta ccagagtcac
1201 ccaagtcagc gcggaagaaa gaggaggccc gccaggcgga gtttgttaga atagggcagg
1261 cactaaaact gaaatccatt gtgagagggg atgctccatc aagcttggca gcttcaggga
1321 tctgtaaaaa agagccgtgg gagccccagt gtttctgcag taatttccct catgaagccg
1381 tgtgtgcaga tccctggggc caggccttgc tggtttccac tgatgctggc gtcttgctag
1441 tggatgatga ccttccatca gtgcccgtgt ttgacagaac tctgccagtg aagcaaatgc
1501 atgtgcttga gaccctggac cttctggttc tcagagcaga caaaggaaaa gatgctcgcc
1561 tctttgtctt caggctaagt gctctgcaaa agggccttga ggggaagcag gctgggaaga
1621 gcaggtctga ctgcagagaa aacaagttgg agaaaacaaa aggctgccac ctgtatgcta
1681 ttaacactca ccacagcaga gagctgagga ttgtggttgc aattcggaat aaactgcttc
1741 tgatcacaag aaaacacaac aagccaagcg gggtcaccag cacctcattg ttatctcccc
1801 tgtctgagtc acctgttgaa gaattccagt acatcaggga gatctgtctg tctgactctc
1861 ccatggtgat gaccttagtg gatgggccag ctgaagagag tgacaatctc atctgtgtgg
1921 cttatcgaca ccaatttgat gtggtgaatg agagcacagg agaagccttc aggctgcacc
1981 acgtggaggc caacagggtt aattttgttg cagctattga tgtgtacgaa gatggagaag
2041 ctggtttgct gttgtgttac aactacagtt gcatctataa aaaggtttgc ccctttaatg
2101 gtggctcttt tttggttcaa ccttctgcgt cagatttcca gttctgttgg aaccaggctc
2161 cctatgcaat tgtctgtgct ttcccgtatc tcctggcctt caccaccgac tccatggaga
2221 tccgcctggt ggtgaacggg aacctggtcc acactgcagt cgtgccgcag ctgcagctgg
2281 tggcctccag gtcggatata tacttcacag caactgcagc tgtgaatgag gtctcatctg
2341 gaggcagctc caagggggcc agtgcccgaa attctcctca gacacccccg ggccgagata
2401 ctccagtatt tccttcttcc ctgggggaag gtgaaattca atcaaaaaat ctgtacaaga
2461 ttccacttag aaacctcgtg ggcagaagca tcgaacgacc tctgaagtca cccttagtct
2521 ccaaggtcat caccccaccc actcccatca gtgtgggcct tgctgccatt ccagtcacgc
2581 actccttgtc cctgtctcgc atggagatca aagaaatagc aagcaggacc cgcagggaac
2641 tactgggcct ctcggatgaa ggtggaccca agtcagaagg agcgccaaag gccaaatcaa
2701 aaccccggaa gcggttagaa gaaagccaag gaggccccaa gccaggggca gtgaggtcat
2761 ctagcagtga caggatccca tcaggctcct tggaaagtgc ttctacttcc gaagccaacc
2821 ctgaggggca ctcagccagc tctgaccagg accctgtggc agacagagag ggcagcccgg
2881 tctccggcag cagccccttc cagctcacgg ctttctccga tgaagacatt atagacttga
2941 agtaacagag ttgaatctca tttgccatct ttagttttct tatggaggtt tatactcttt
3001 aaacagttct gatgtaattt ctcaaca
//