LOCUS AK294862 1694 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60512 complete cds, highly similar to
Tetratricopeptide repeat protein 16.
ACCESSION AK294862
VERSION AK294862.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1694)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1694
/clone="BRAWH3018946"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489486"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 83..1192
/codon_start=1
/note="highly similar to Tetratricopeptide repeat protein
16"
/protein_id="BAG57966.1"
/transl_table=1
/translation="MTDSDEDALKVDQGPSRDIPKPWVIPAPKGILQHIFGTSHVFQS
ICDVKPKVTGLTVPLKVREYYSRGQQCLEQADWETAVLLFSRALHLDPQLGQCLFEQC
AFLDALNVFSHAAELQPEKPCFRYRCMACLLALKQHQACLTLITNELKQDTTNADVYI
FRARLYNFLQKPHLCYRDLHSALLLNPKHPQARMLLQKMVAQAQQARQDAGILAVQGK
LQHALQRINRAIENNPLDPSLFLFRGTMYRRLQEFDGAVEDFLKVLDMVTEDQEDMVR
QAQRQLLLTYNDFAVHCYRQGAYQEGVLLLNKALRDEQQEKGLYINRGGAQRPGHWGG
GVRGSLAISKAPTGHLRPLGGRRKGERKEAREEEM"
BASE COUNT 369 a 504 c 530 g 291 t
ORIGIN
1 ctggtgatgg tgcctagcaa cgtcagggcc agggccgcga ggtagttggc agaggcctcg
61 gggtcctcct ggaaggggcc tcatgacaga ttcggacgag gatgccctga aggttgacca
121 gggcccctca cgggacatcc caaagccatg ggtgattcca gcccccaaag ggatcctgca
181 gcacatcttt gggaccagcc acgtgttcca aagcatctgt gatgtaaaac caaaggtcac
241 agggttaaca gtgcccctca aagtcaggga atactactcc agaggccagc agtgcttgga
301 gcaggcagac tgggagacag ctgtgctgct cttctcccgc gcactccacc tggacccaca
361 gctgggacaa tgcctttttg agcagtgtgc cttcctggat gccctgaatg tcttctcaca
421 tgctgctgag ctccagcctg agaaaccatg cttccgttac cgatgcatgg cctgtctcct
481 ggccctcaag cagcatcagg cctgcctcac gctcatcacc aacgagctga agcaggacac
541 caccaacgcc gatgtctaca tcttccgggc cagactctac aactttctcc agaagcccca
601 cctctgctac cgggacctgc acagcgcctt gctgttgaat cccaagcacc cgcaggccag
661 gatgctgctc cagaagatgg tggcccaggc ccagcaggcg cgccaagatg cggggatcct
721 ggctgtgcag ggcaagctgc agcacgcact gcagcggatc aaccgtgcca tcgagaacaa
781 ccctctggac cccagtctct tcctcttccg gggcaccatg taccgacggc tccaggagtt
841 cgatggggca gtggaggact tcctgaaggt gctggacatg gtgaccgagg accaggagga
901 catggtgcgg caggcacagc gccagctgtt gctgacctac aacgactttg ccgtgcactg
961 ctacaggcag ggcgcctacc aggagggcgt gctgctgctg aacaaggccc tccgggacga
1021 gcagcaggag aaaggactct acatcaaccg aggcggtgcg cagcgaccag ggcactgggg
1081 agggggggtg cgggggagcc tcgccatctc taaggccccc actgggcact tgaggcccct
1141 ggggggaagg aggaagggag agaggaagga agcaagggaa gaggaaatgt aatagtttca
1201 gtatcccagg aacacacttt gggaaatgtt gccttagaca aactggctcc agactcctta
1261 aaatgctcaa aacaggcagc tggggaacag tgcccagacg cccagaaaac tagagaggac
1321 ggagactgcg gcggggggtt atcagccacc agtttcaggc cctggccccc gggctggagc
1381 cggctgggct ggggctcccg ggcactggga gttgggggtc cactcacccc cgcctccgga
1441 ccctagattg cttcttccag ctgggcaacc tggcctttgc cgaggcggac taccagcagg
1501 cgctggcgct gagccctcag gacgagggcg ccaacacgcg catgggcctg ctgcaggaga
1561 agatgggctt ctgcgagcag aggcgcaagt ggatcgcctg aggtcgagag tttgagacca
1621 atctggccaa tatgatggag tctcactctg ttgcccagac tggagtgtaa tggcgccatc
1681 tcggctcgct gcaa
//