LOCUS AK294856 1555 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52883 complete cds, highly similar to DNA
excision repair protein ERCC-8.
ACCESSION AK294856
VERSION AK294856.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1555
/clone="BRAWH3018420"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489480"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 429..1160
/codon_start=1
/note="highly similar to DNA excision repair protein
ERCC-8"
/protein_id="BAG57960.1"
/transl_table=1
/translation="MGYKYITIGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPR
YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS
DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG
STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPD
DDETTTKSQLNPAFEDAWSSSDEEG"
BASE COUNT 457 a 290 c 342 g 466 t
ORIGIN
1 agagctctgt catggcgacg tccagtgctc cagccggtgt gaggacacga tatgctgggg
61 tttttgtccg cacgccaaac gggtttggag gaccctcttc gccttcggag agcagagtca
121 acacggagag ttttgggact ggaattaaat aaagacagag atgttgaaag aatccacggc
181 ggtggaatta acacccttga cattgaacct gttgaaggga gatacatgtt atcaggtggt
241 tcagatggtg tgattgtact ttatgacctt gagaactcca gcagacaatc ttattacaca
301 tgtaaagcag tgtgttccat tggcagagat catcctgatg ttcacagata cagtgtggag
361 actgtacagt ggtatcctca tgacactggc atgttcacat caagctcatt tgataaaact
421 ctgaaagtat gggatacaaa tacattacaa ttggtactag aggacccaaa gtacaacttt
481 gtgacttgaa gtctggatcc tgttctcaca ttctacaggg tcacagacaa gaaatattag
541 cagtttcctg gtctccacgt tatgactata tcttggcaac agcaagtgct gacagtagag
601 taaaattatg ggatgtgaga agagcatcag gatgtttgat tactcttgat caacataatg
661 ggaaaaagtc acaagctgtt gaatcagcaa acactgctca taatgggaaa gttaatggct
721 tatgttttac aagtgatgga cttcacctcc tcactgttgg tacagataat cgaatgaggc
781 tctggaatag ttccaatgga gaaaacacac ttgtgaacta tggaaaagtt tgtaataaca
841 gtaaaaaagg attgaaattc actgtctcct gtggctgcag ttcagaattt gtttttgtac
901 catatggtag caccattgct gtttatacag tttactcagg agaacagata actatgctta
961 agggacatta taaaactgtt gactgctgtg tatttcagtc aaatttccag gaactttata
1021 gtggtagcag agactgcaac attctggctt gggttccatc cttatatgaa ccagttcctg
1081 atgatgatga gactacaaca aaatcacaat taaatccggc ctttgaagat gcctggagca
1141 gcagtgatga agaaggatga atatcatctt tagtaccttt ttgtctctgc tgaaactttt
1201 taaatgagac tgtgtttttt tcaactgtat ggtctattcc tgacagctaa attagcccta
1261 aatgtgggta atatttttcc tcatgtttta aaatgaggtt aatatttgca taaaatccta
1321 aaacagactt ctgtatagtt tatttagtca aaatgtgttc cttgatccca gatgttgtgg
1381 cctgggaaag ccctcattgc tacagtacaa gtaacacaag tcgttgtacc tcagttgtga
1441 ccttcagcag attttatgaa ctataagatg cagtctcaga ggatcagcaa gtggaggcca
1501 tcagtattga ctttctctta cttgctgtac tatcagcctg ctcgtttcca ccttt
//