LOCUS AK294850 3548 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58504 complete cds, highly similar to
Tripartite motif-containing protein 37.
ACCESSION AK294850
VERSION AK294850.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3548)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3548
/clone="BRAWH3017897"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489474"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 366..3158
/codon_start=1
/note="highly similar to Tripartite motif-containing
protein 37"
/protein_id="BAG57954.1"
/transl_table=1
/translation="MDEQSVERWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDT
LQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIY
EQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMMIARLD
TQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQQVH
RKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWRL
KVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFE
VGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQ
TSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEG
GPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTA
TSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKD
QRKQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSA
DQAALAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSL
RRAVDPGENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKA
LDSDAVVVAVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPE
GASAAPEEGMSSDSDIECDTENEEQGEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQ
IGPEDLSFNTDENSGR"
BASE COUNT 1026 a 735 c 908 g 879 t
ORIGIN
1 gaattctctg cggcaccttc ttcgcggaac tccaccgtca gttccatagg cgcgcgcccg
61 cgtcacgtgg gccgaggttc cggcgcggct gctggccggc ggctgagccg ggagaaagga
121 gctgcggcca ccgttcgccc tacttctgcg cctcggggcg ggcgcgccgg taaaaatggc
181 gaaatggggg taggcggcgc tggacctgaa gagatggggc gcgcaggtgg ggcggttgtc
241 agagccccct gacgtgggcg ccgggctttt atcggcgatt tgatctggcg acctcgggcc
301 ggcgcctaag aggtcagact gcggagcctg cgggtcgcca gcggccccgc cgagagccgg
361 aggcaatgga tgaacagagc gtggagcgct ggctgacaga gcagagagct caatgtcctc
421 attgccgtgc tccactccag ctacgagaac tagtaaattg tcgttgggca gaagaagtaa
481 cacaacagct tgatactctt cagctctgca gtctcaccaa acatgaagaa aatgaaaagg
541 acaaatgtga aaatcaccat gaaaaactta gtgtattttg ctggacttgt aagaagtgta
601 tctgccatca gtgtgcactt tggggaggaa tgcatggcgg acataccttt aaacctttgg
661 cagaaattta tgagcaacac gtcactaaag tgaatgaaga ggtagccaaa cttcgtcggc
721 gtctcatgga actgatcagc ttagttcaag aagtggaaag gaatgtagaa gctgtaagaa
781 atgcaaaaga tgagcgtgtt cgggaaatta ggaatgcagt ggagatgatg attgcacggt
841 tagacacgca gctgaagaat aagcttataa cactgatggg tcagaagaca tctctaaccc
901 aagaaacaga gcttttggaa tccttacttc aggaggtgga gcaccagttg cggtcttgta
961 gtaagagtga gttgatatct aagagctcag agatccttat gatgtttcag caagttcatc
1021 ggaagcccat ggcatctttt gttaccactc ctgttccacc agactttacc agtgaattag
1081 tgccatctta cgattcagct acttttgttt tagagaattt cagcactttg cgtcagagag
1141 cagatcctgt ttacagtcca cctcttcaag tttcaggact ttgctggagg ttaaaagttt
1201 acccagatgg aaatggagtt gtgcgaggtt actacttatc tgtgtttctg gagctctcag
1261 ctggcttgcc tgaaacttct aaatatgaat atcgtgtaga gatggttcac cagtcctgta
1321 atgatcctac aaaaaatatc attcgagaat ttgcatctga ctttgaagtt ggagaatgct
1381 ggggctataa tagatttttc cgtttggact tactcgcaaa tgaaggatac ttgaatccac
1441 aaaatgatac agtgatttta aggtttcagg tacgttcacc aactttcttt caaaaatccc
1501 gggaccagca ttggtacatt actcagttgg aagctgcaca gactagttat atccaacaaa
1561 taaacaacct taaagagaga cttactattg agctgtctcg aactcagaag tcaagagatt
1621 tgtcaccacc agataaccat cttagccccc aaaatgatga tgctctggag acacgagcta
1681 agaagtctgc atgctctgac atgcttctcg aaggtggtcc tactacagct tctgtaagag
1741 aggccaaaga ggatgaagaa gatgaggaga agattcagaa tgaagattat catcacgagc
1801 tttcagatgg agatctggat ctggatcttg tttatgagga tgaagtaaat cagctcgatg
1861 gcagcagttc ctctgctagt tccacagcaa caagtaatac agaagaaaat gatattgatg
1921 aagaaactat gtctggagaa aatgatgtgg aatataacaa catggaatta gaagagggag
1981 aactcatgga agatgcagct gctgcaggac ccgcaggtag tagccatggt tatgtgggtt
2041 ccagtagtag aatatcaaga agaacacatt tatgctccgc tgctaccagt agtttactag
2101 acattgatcc attaatttta atacatttgt tggaccttaa ggaccggagc agtatagaaa
2161 atttgtgggg cttacagcct cgcccacctg cttcacttct gcagcccaca gcatcatatt
2221 ctcgaaaaga taaagaccaa aggaagcaac aggcaatgtg gcgagtgccc tctgatttaa
2281 agatgctaaa aagactcaaa actcaaatgg ccgaagttcg atgtatgaaa actgatgtaa
2341 agaatacact ttcagaaata aaaagcagca gtgctgcttc tggagacatg cagacaagcc
2401 ttttttctgc tgaccaggca gctctggctg catgtggaac tgaaaactct ggcagattgc
2461 aggatttggg aatggaactc ctggcaaagt catcagttgc caattgttac atacgaaact
2521 ccacaaataa gaagagtaat tcgcccaagc cagctcgatc cagtgtagca ggtagtctat
2581 cacttcgaag agcagtggac cctggagaaa atagtcgttc aaagggagac tgtcagactc
2641 tgtctgaagg ctccccagga agctctcagt ctgggagcag gcacagttct ccccgagcct
2701 tgatacatgg cagtatcggt gatattctgc caaaaactga agaccggcag tgtaaagctt
2761 tggattcaga tgctgttgtg gttgcagttt tcagtggctt gcctgcggtt gagaaaagga
2821 ggaaaatggt caccttgggg gctaatgcta aaggaggtca tctggaagga ctgcagatga
2881 ctgatttgga aaataattct gaaactggag agttacagcc tgtactacct gaaggagctt
2941 cagctgcccc tgaagaagga atgagtagcg acagtgacat tgaatgtgac actgagaatg
3001 aggagcaggg agagcatacc agtgtgggcg ggtttcacga ctccttcatg gtcatgacac
3061 agcccccgga tgaagataca cattccagtt ttcctgatgg tgaacaaata ggccctgaag
3121 atctcagctt caatacagat gaaaatagtg gaaggtaatt gccaaatcaa gagaactgac
3181 ttgcaagcta ccttgaccct gaattttgct gtagttggtg ctcaaatttg tcatcagtca
3241 gataatcaga tttggtctta tttcttcatt atctcgacct gaaatagtaa tttggaaact
3301 gttggaaggt ggcacagttt agtctaagac agcagtagta catgggaaaa acagtatggg
3361 aagagttctt tgtaatgtaa ggaaataaca atgtagttct ctattaattt agcaaatttg
3421 tacattcaca aaaggcagtt tgtctactac agcagaaggc tggttaactg ccagaaaatg
3481 tacctccagg ccctgcatgc cgtcagtaac ccgcccggca ttggtgctct actgtctttg
3541 gctagagc
//