LOCUS AK294827 2988 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58503 complete cds, highly similar to
Proto-oncogene tyrosine-protein kinase receptorret precursor (EC
2.7.10.1).
ACCESSION AK294827
VERSION AK294827.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2988)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2988
/clone="BRAWH3015374"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489451"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 175..2631
/codon_start=1
/note="highly similar to Proto-oncogene tyrosine-protein
kinase receptorret precursor (EC 2.7.10.1)"
/protein_id="BAG57939.1"
/transl_table=1
/translation="MVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKRKEDTVVATLRV
FDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFVRATVHDYRL
VLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPSTYSLSVSR
RARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFVNDTKA
LRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLECEE
CGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLRG
SIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSF
IVSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQV
SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE
NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR
KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR
NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWS
FGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDK
RPVFADISKDLEKMMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRAL
PSTWIENKLYGRISHAFTRF"
BASE COUNT 646 a 846 c 880 g 616 t
ORIGIN
1 agtgatcacg cggggcccct gtctgcttgg tgcgcaggtg agggtctgcc cttccgctgc
61 gccccggaca gcctggaggt gagcacgcgc tgggccctgg accgcgagca gcgggagaag
121 tacgagctgg tggccgtgtg caccgtgcac gccggcgcgc gcgaggaggt ggtgatggtg
181 cccttcccgg tgaccgtgta cgacgaggac gactcggcgc ccaccttccc cgcgggcgtc
241 gacaccgcca gcgccgtggt ggagttcaag cggaaggagg acaccgtggt ggccacgctg
301 cgtgtcttcg atgcagacgt ggtacctgca tcaggggagc tggtgaggcg gtacacaagc
361 acgctgctcc ccggggacac ctgggcccag cagaccttcc gggtggaaca ctggcccaac
421 gagacctcgg tccaggccaa cggcagcttc gtgcgggcga ccgtacatga ctataggctg
481 gttctcaacc ggaacctctc catctcggag aaccgcacca tgcagctggc ggtgctggtc
541 aatgactcag acttccaggg cccaggagcg ggcgtcctct tgctccactt caacgtgtcg
601 gtgctgccgg tcagcctgca cctgcccagt acctactccc tctccgtgag caggagggct
661 cgccgatttg cccagatcgg gaaagtctgt gtggaaaact gccaggcgtt cagtggcatc
721 aacgtccagt acaagctgca ttcctctggt gccaactgca gcacgctagg ggtggtcacc
781 tcagccgagg acacctcggg gatcctgttt gtgaatgaca ccaaggccct gcggcggccc
841 aagtgtgccg aacttcacta catggtggtg gccaccgacc agcagacctc taggcaggcc
901 caggcccagc tgcttgtaac agtggagggg tcatatgtgg ccgaggaggc gggctgcccc
961 ctgtcctgtg cagtcagcaa gagacggctg gagtgtgagg agtgtggcgg cctgggctcc
1021 ccaacaggca ggtgtgagtg gaggcaagga gatggcaaag ggatcaccag gaacttctcc
1081 acctgctctc ccagcaccaa gacctgcccc gacggccact gcgatgttgt ggagacccaa
1141 gacatcaaca tttgccctca ggactgcctc cggggcagca ttgttggggg acacgagcct
1201 ggggagcccc gggggattaa agctggctat ggcacctgca actgcttccc tgaggaggag
1261 aagtgcttct gcgagcccga agacatccag gatccactgt gcgacgagct gtgccgcacg
1321 gtgatcgcag ccgctgtcct cttctccttc atcgtctcgg tgctgctgtc tgccttctgc
1381 atccactgct accacaagtt tgcccacaag ccacccatct cctcagctga gatgaccttc
1441 cggaggcccg cccaggcctt cccggtcagc tactcctctt ccggtgcccg ccggccctcg
1501 ctggactcca tggagaacca ggtctccgtg gatgccttca agatcctgga ggatccaaag
1561 tgggaattcc ctcggaagaa cttggttctt ggaaaaactc taggagaagg cgaatttgga
1621 aaagtggtca aggcaacggc cttccatctg aaaggcagag cagggtacac cacggtggcc
1681 gtgaagatgc tgaaagagaa cgcctccccg agtgagcttc gagacctgct gtcagagttc
1741 aacgtcctga agcaggtcaa ccacccacat gtcatcaaat tgtatggggc ctgcagccag
1801 gatggcccgc tcctcctcat cgtggagtac gccaaatacg gctccctgcg gggcttcctc
1861 cgcgagagcc gcaaagtggg gcctggctac ctgggcagtg gaggcagccg caactccagc
1921 tccctggacc acccggatga gcgggccctc accatgggcg acctcatctc atttgcctgg
1981 cagatctcac aggggatgca gtatctggcc gagatgaagc tcgttcatcg ggacttggca
2041 gccagaaaca tcctggtagc tgaggggcgg aagatgaaga tttcggattt cggcttgtcc
2101 cgagatgttt atgaagagga ttcctacgtg aagaggagcc agggtcggat tccagttaaa
2161 tggatggcaa ttgaatccct ttttgatcat atctacacca cgcaaagtga tgtatggtct
2221 tttggtgtcc tgctgtggga gatcgtgacc ctagggggaa acccctatcc tgggattcct
2281 cctgagcggc tcttcaacct tctgaagacc ggccaccgga tggagaggcc agacaactgc
2341 agcgaggaga tgtaccgcct gatgctgcaa tgctggaagc aggagccgga caaaaggccg
2401 gtgtttgcgg acatcagcaa agacctggag aagatgatgg ttaagaggag agactacttg
2461 gaccttgcgg cgtccactcc atctgactcc ctgatttatg acgacggcct ctcagaggag
2521 gagacaccgc tggtggactg taataatgcc cccctccctc gagccctccc ttccacatgg
2581 attgaaaaca aactctatgg tagaatttcc catgcattta ctagattcta gcaccgctgt
2641 cccctctgca ctatccttcc tctctgtgat gctttttaaa aatgtttctg gtctgaacaa
2701 aaccaaagtc tgctctgaac ctttttattt gtaaatgtct gactttgcat ccagtttaca
2761 tttaggcatt attgcaacta tgtttttcta aaaggaagtg aaaataagtg taattaccac
2821 attgcccagc aacttaggat ggtagaggaa aaaacagatc agggcggaac tctcagggga
2881 gaccaagaac aggttgaata aggcgcttct ggggtgggaa tcaagtcata gtacttctac
2941 tttaactaag tggataaata tacaaatctg gggaggtatt cagttgag
//