LOCUS AK294806 801 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56682 complete cds, highly similar to Homo
sapiens PTD016 protein, mRNA.
ACCESSION AK294806
VERSION AK294806.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 801)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..801
/clone="BRAWH3012786"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489430"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 186..770
/codon_start=1
/note="highly similar to Homo sapiens PTD016 protein,
mRNA"
/protein_id="BAG57925.1"
/transl_table=1
/translation="MQANRSQLHSPPGTGSSEDASTPQCVHTRLTGEGSCPHSGDVHI
QINSIPKECAENASSRNIRSGVHSCAHGCVHSRLRGHSHSEARLTDDTAAESGDHGSS
SFSEFRYLFKWLQKSLPYILILSVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLR
ERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLYYR"
BASE COUNT 215 a 177 c 191 g 218 t
ORIGIN
1 gttgccgccg ggctgagaga agagcttgcg gggtttgcgg ttgatggccc cgactgaagg
61 gctggaggcg gtgtatgccg ctgttcttgc tgtcgctccc gacacctccg tccgcttctg
121 gtcatgagag gagacagagg cctgaagcaa agacatctgg gtcagagaaa aagtatttaa
181 gggccatgca agccaatcgt agccaactgc acagtcctcc aggaactgga agcagtgagg
241 atgcctcaac ccctcagtgt gtccacacaa gattgacagg agagggttct tgccctcatt
301 ctggagatgt tcatatccag ataaactcca tacctaaaga atgtgcagaa aatgcaagct
361 ccagaaatat aaggtcaggt gtccatagct gtgcccatgg atgtgtacac agtcgcttac
421 ggggtcactc ccacagtgaa gcaaggctga ctgatgatac tgccgcagaa tctggagatc
481 atggtagtag ctccttctca gaattccgct atctcttcaa gtggctgcaa aaaagtcttc
541 catatatttt gattctgagc gtcaaacttg ttatgcagca tataacagga atttctcttg
601 gaattgggct gctaacaact tttatgtatg caaacaaaag cattgtaaat caggtttttc
661 taagagaaag gtcctcaaag attcagtgtg cttggttact ggtattctta gcaggatctt
721 ctgttctttt atattacacc tttcattctc agtcacttta ttacaggtaa ttagaggtcc
781 aaatacacaa ttacattttt a
//