LOCUS AK294792 4537 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54506 partial cds, highly similar to
Ryanodine receptor 2.
ACCESSION AK294792
VERSION AK294792.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4537)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4537
/clone="BRAWH3010272"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489416"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 274..>4537
/codon_start=1
/note="highly similar to Ryanodine receptor 2"
/protein_id="BAG57915.1"
/transl_table=1
/translation="MKTGLESVKSALRAFLDNAAEDLEKTMENLKQGQFTHTRNQPKG
VTQIINYTTVALLPMLSSLFEHIGQHQFGEDLILEDVQVSCYRILTSLYALGTSKSIY
VERQRSALGECLAAFAGAFPVAFLETHLDKHNIYSIYNTKSSRERAALSLPTNVEDVC
PNIPSLEKLMEEIVELAESGIRYTQMPHVMEVILPMLCSYMSRWWEHGPENNPERAEM
CCTALNSEHMNTLLGNILKIIYNNLGIDEGAWMKRLAVFSQPIINKVKPQLLKTHFLP
LMEKLKKKAATVVSEEDHLKAEARGDMSEAELLILDEFTTLARDLYAFYPLLIRFVDY
NRAKWLKEPNPEAEELFRMVAEVFIYWSKSHNFKREEQNFVVQNEINNMSFLITDTKS
KMSKAAVSDQERKKMKRKGDRYSMQTSLIVAALKRLLPIGLNICAPGDQELIALAKNR
FSLKDTEDEVRDIIRSNIHLQGKLEDPAIRWQMALYKDLPNRTDDTSDPEKTVERVLD
IANVLFHLEQKSKRVGRRHYCLVEHPQRSKKAVWHKLLSKQRKRAVVACFRMAPLYNL
PRHRAVNLFLQGYEKSWIETEEHYFEDKLIEDLAKPGAEPPEEDEGTKRVDPLHQLIL
LFSRTALTEKCKLEEDFLYMAYADIMAKSCHDEEDDDGEEEVKSFEHDIIKDLRNKFA
SLGENSLEKEMEKQKLLYQQARLHDRGAAEMVLQTISASKGETGPMVAATLKLGIAIL
NGGNSTVQQKMLDYLKEKKDVGFFQSLAGLMQSCSVLDLNAFERQNKAEGLGMVTEEG
SGEKVLQDDEFTCDLFRFLQLLCEGHNSDFQNYLRTQTGNNTTVNIIISTVDYLLRVQ
ESISDFYWYYSGKDVIDEQGQRNFSKAIQVAKQVFNTLTEYIQGPCTGNQQSLAHSRL
WDAVVGFLHVFAHMQMKLSQDSSQIELLKELMDLQKDMVVMLLSMLEGNVVNGTIGKQ
MVDMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGVISKRDFHKAMESHK
HYTQSETEFLLSCAETDENETLDYEEFVKRFHEPAKDIGFNVAVLLTNLSEHMPNDTR
LQTFLELAESVLNYFQPFLGRIEIMGSAKRIERVYFEISESSRTQWEKPQVKESKRQF
IFDVVNEGGEKEKMELFVNFCEDTIFEMQLAAQISESDLNERSANKEESEKERPEEQG
PRMAFFSILTVRSALFALRYNILTLMRMLSLKSLKKQMKKVKKMTVKDMVTAFFSSYW
SIFMTLLHFVASVFRGFFRIICSLLLGGSLVEGAKKIKVAELLANMPDPTQDEVRGDG
EEGERKPLEAALPSEDLTDLKELTEESDLLSDIFGLDLKREGGQYKLIPHNPNAGLSD
LMSNPVPMPEVQEKFQEQKAKEEEKEEKEETKSEPEKAEGEDG"
BASE COUNT 1373 a 938 c 1122 g 1104 t
ORIGIN
1 tattgagaaa cgatttgcct atagtttcct ccaacaactc attcgctatg tggatgaagc
61 ccatcagtat atcctggagt ttggtcgttc ttcctttaat tgatcagtat ttcaaaaacc
121 atcgtttata cttcttatct gcagcaagca gacctctctg ctctggagga catgcttcca
181 acaaagagaa agaaatggtg actaggcaat gatgcaacat caattgtcaa ctgtcttcat
241 attttgggtc agactttgga tgcaaggaca gtgatgaaga ctggcctgga gagtgttaaa
301 agtgcactca gagcttttct ggacaacgct gcagaggatc tggagaagac catggaaaac
361 ctcaagcagg gccagttcac tcacacccga aaccagccca aaggggttac tcagattatc
421 aattacacca cagtggccct gctgccaatg ctgtcgtcat tatttgagca tattggccag
481 catcagttcg gagaagacct aatattggaa gatgtccagg tgtcttgtta tagaattctg
541 actagcttat atgctttggg aaccagcaag agtatttacg tggagaggca acgttctgca
601 ttaggagaat gtctagctgc ctttgctggt gcttttcctg tagcattttt ggaaactcat
661 ctggacaaac ataatattta ctccatctac aataccaagt cttcacgaga aagagcagct
721 ctcagtttgc caactaatgt ggaagatgtt tgtccaaaca taccgtcttt ggagaaactc
781 atggaagaaa tcgtggaatt agccgagtcc ggcattcgct acactcaaat gccacatgtc
841 atggaagtca tactgcccat gctttgcagc tacatgtctc gttggtggga gcatggacct
901 gagaacaatc cagaacgggc cgagatgtgc tgcacagccc tgaactcaga gcacatgaac
961 acacttctag ggaacatatt gaaaatcata tataataact tggggattga tgagggagcc
1021 tggatgaaga ggctagcagt gttttcccag cctataataa ataaagtgaa acctcagctc
1081 ttgaaaactc atttcttgcc gttaatggag aaactcaaga aaaaggcagc tacggtggtg
1141 tctgaggaag accacctgaa agctgaggcc aggggggaca tgtcggaggc agaactcctc
1201 atcctagatg agttcaccac actggccaga gatctctatg ccttctaccc tctcttgatt
1261 agatttgtgg actataacag ggcaaagtgg ctaaaggagc ctaacccaga agcagaggag
1321 ctcttccgca tggtggctga agtgtttatc tactggtcga agtcccataa tttcaaaaga
1381 gaagagcaga acttcgttgt acagaatgaa atcaacaata tgtctttcct tattactgat
1441 accaagtcaa agatgtcaaa ggcagctgtt tctgatcagg aaaggaagaa aatgaagcgc
1501 aaaggagatc ggtattccat gcagacctct ctgattgtag cagctctgaa gcggttactg
1561 cccattgggt tgaacatctg tgcccctggg gaccaggagc tcattgctct ggccaaaaat
1621 cgatttagcc tgaaagatac tgaggatgaa gtacgagata taatccgcag caatattcat
1681 ttacaaggca agttggagga tcctgctatt agatggcaaa tggctcttta caaagactta
1741 ccaaacagga ctgatgatac ctcagatcca gagaagacgg tagaaagagt attggatata
1801 gcaaatgtgc tttttcatct tgaacagaag tctaaacgtg tgggtcggag acattactgt
1861 ctggtggaac atcctcagag atctaaaaag gctgtatggc ataaactact gtctaagcag
1921 aggaaaaggg ctgttgtagc ctgcttccgg atggccccct tatataatct gccaaggcat
1981 cgggctgtca atctctttct tcagggatat gaaaagtctt ggattgaaac agaagaacat
2041 tactttgaag ataaactgat agaagattta gcaaaacctg gggctgaacc tccagaagaa
2101 gatgaaggca ctaagagagt tgatcctcta catcagctga tccttctgtt tagtcggaca
2161 gctttaacag agaaatgcaa actggaagaa gattttttat atatggccta tgcagatatt
2221 atggcaaaga gttgtcatga tgaggaagat gacgatggtg aagaggaagt gaagagtttt
2281 gaacacgata ttatcaaaga tttaagaaac aaatttgcca gcctcggcga gaactctctg
2341 gaaaaagaaa tggaaaagca aaagcttcta taccagcaag cccgactcca cgatcgtggc
2401 gcggctgaga tggtgctaca gacaatcagt gccagcaaag gtgaaactgg accaatggta
2461 gcagctactc tgaaacttgg aattgctatt ttaaatggtg ggaactccac agtacagcag
2521 aaaatgcttg actacctcaa ggagaaaaag gatgtgggct tctttcagag cctggccggc
2581 ctgatgcagt catgtagtgt ccttgaccta aatgcatttg agcgacaaaa caaagctgaa
2641 ggtcttggga tggtgacaga ggaaggatca ggagaaaagg ttctgcagga cgatgagttc
2701 acctgtgacc tcttccgatt cctgcaacta ctctgtgagg gacacaactc agattttcag
2761 aattatctga gaactcagac tggcaataat acaactgtca acataattat ctccactgta
2821 gactacctac tgagagttca ggaatcaatt agtgactttt attggtatta ctctgggaaa
2881 gatgttattg atgaacaagg acaacggaat ttctccaaag ctatccaagt ggcaaaacaa
2941 gtctttaaca ctcttacaga gtatattcag ggtccttgca ctgggaatca acagagtttg
3001 gcacacagca ggctgtggga tgctgtggtc ggctttcttc atgtgtttgc ccatatgcag
3061 atgaagctgt cgcaggattc cagtcaaatt gagctattaa aagaattaat ggatctgcag
3121 aaggatatgg tggtcatgtt gctgtccatg ttagaaggta atgttgttaa tggaacgatt
3181 ggcaaacaga tggtggatat gcttgtggaa tcttccaaca acgtggagat gattctcaaa
3241 ttttttgaca tgttcttaaa actaaaggat ttgacgtcgt ctgatacttt taaagaatat
3301 gaccccgatg gcaagggagt catttccaag agggacttcc acaaagcgat ggagagccat
3361 aagcactaca cgcagtcaga aacggaattt cttttgtctt gtgcggagac ggatgagaat
3421 gaaaccctcg actacgaaga gttcgtcaaa cgcttccacg aacctgcgaa ggacatcggc
3481 ttcaacgtcg ccgtccttct gacaaacctc tctgagcaca tgcccaacga tacccgactt
3541 cagacttttc tggaattagc agagagcgtc ctgaattatt tccagccctt tctgggccgc
3601 atcgaaatca tgggaagcgc caaacgcatc gagagggtct attttgaaat cagtgagtcc
3661 agccgaaccc agtgggagaa gccccaggtc aaggagtcca aaagacagtt catatttgac
3721 gtggtcaacg aaggcggaga gaaagagaag atggaactct ttgtaaactt ctgcgaggac
3781 accatctttg aaatgcagct ggcggctcag atctcggagt cggacttgaa cgagaggtca
3841 gcgaataagg aagaaagcga gaaggagagg ccggaagagc aggggccgag gatggctttc
3901 ttctccattc tgacggtcag gtcggccctg tttgcgctca ggtacaatat cttgaccctt
3961 atgcgaatgc tcagtctgaa gagcctgaag aagcagatga aaaaagtaaa aaagatgacc
4021 gtgaaggaca tggtcacggc cttcttttca tcctactgga gtattttcat gaccctcttg
4081 cacttcgtgg ccagcgtttt cagaggcttt ttccgcatca tttgcagcct gctgcttggg
4141 ggaagcctcg tcgaaggtgc taaaaagatc aaagttgcag aactgttagc caacatgcca
4201 gaccccactc aggatgaggt tagaggagat ggggaggagg gagagaggaa acccctggaa
4261 gccgccctgc cctccgagga tctgaccgac ttaaaggagc tgacagagga aagtgacctt
4321 ctttcggaca tctttggcct ggatctgaag agagaaggag gacagtacaa actgattcct
4381 cataatccaa atgctgggct cagtgacctc atgagcaacc cagtccccat gcctgaggtg
4441 caggaaaaat ttcaggaaca gaaggcaaaa gaagaagaaa aggaagaaaa agaagaaacc
4501 aaatctgaac ctgaaaaagc cgagggagaa gatggag
//