LOCUS AK294787 4193 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61589 partial cds.
ACCESSION AK294787
VERSION AK294787.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4193)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4193
/clone="BRAWH3009801"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489411"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 384..>4193
/codon_start=1
/protein_id="BAG57912.1"
/transl_table=1
/translation="MSEAPRFFVGPEDTEINPGNYRHFFHHADEDDEEEDDSPPERQI
VVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHS
KGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNN
PKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSR
SSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSE
GKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKY
YDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDR
TPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDS
EIEENKPKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPETSSEEEDSRREEPSLLLV
LKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASD
EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLH
EILQKDRDFTAEDYEKLTPSGSISLIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRME
DPKSSDIQLYHSETLELMLRRWSKLERDFKTKNGRYDISKIPDIYDCIKYDVQHNGSL
KLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDT
VNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCNTNDSQNEDGGMVK
EMESKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKG
CEEDKNLPSGYGYRPASRENEGRRPFKIDNDDEPHTSKRDEVDRAVILFKPMVSEPIH
IHRKSPLPRSRKTATNDEESPLSVSSPEGTGTWLHYTSGVGTGRRRRRSGEQITSSPV
SPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSHCAGLFSTSVLGGSS
SAPNLQDYARTHRKKLTSSGCIDDATRGSAVKRFSISFARHPTNEHLHLYRCWSVSSV
EFLGSSGFELYSMVPSICPLETLHNALSLKQVDEFLASIASPSSDVPRKTAEISSTAL
RSSPIMRKKVSLNTYTPAKILPTPPATLKSTKASSKPATSGPSSAVVPNTSSRKKNIT
SKTETHEH"
BASE COUNT 1351 a 792 c 874 g 1176 t
ORIGIN
1 aacacctcac ccctgcctcc gggatgaaag ggggtaacct agacctgaat gggcttgacc
61 atctcacaac tgctcgcgtg acgaccgcat tcgtggcagg taagaagatt gctgtatcaa
121 ctcaagaaag cagtaacttc actgtctttg tattttgaat tgcaacaaca actttgatat
181 caacaatgaa gcaatgatat ctaagaacaa aagagtattt gccaacagtc atcataatat
241 caagtgattg tataagcaga aacaagctgt cacagacctg tgcgtcagct aatatatgga
301 gaatgctttc ttctgatact atttacttag aggcagtttt aatataaatc atttcaatta
361 tatctacatc aaataaaata aaaatgagtg aagcccccag attcttcgtt ggaccagaag
421 atacagaaat aaatcctgga aattatcgac atttcttcca ccatgcagat gaagacgatg
481 aggaggaaga tgattctcca ccagaaaggc agattgtggt tggaatatgt tccatggcaa
541 agaaatccaa atccaaacca atgaaggaaa ttcttgaacg gatctcctta tttaaatata
601 tcacagtagt agtatttgaa gaggaggtta ttttgaatga accagtggaa aactggcctt
661 tatgtgattg tcttatttct ttccattcta aaggatttcc actggacaaa gcggttgcct
721 atgcaaaact caggaatcca tttgtaatca atgacttgaa tatgcagtat ctcatacaag
781 ataggagaga agtatatagt attcttcaag ctgaaggtat tttacttcct cgttatgcta
841 ttttgaaccg tgacccaaat aatcccaaag aatgtaatct gattgaaggg gaagatcatg
901 tagaagtaaa tggggaagtt tttcaaaagc catttgtaga aaagccagtc agtgcagaag
961 atcacaatgt ttacatttat tacccaactt ctgctggtgg tggaagtcaa agactcttta
1021 gaaagattgg cagtagaagt agtgtttatt ctccagaaag caatgtacga aaaacaggct
1081 catatatata tgaagagttt atgcccacag atggtactga tgttaaggtt tatacagtgg
1141 gtccagatta tgcccatgct gaagctcgaa aatctccagc acttgatggc aaggtggaac
1201 gagacagtga aggaaaagaa gtaagatacc ctgttattct caatgcacga gagaaattaa
1261 ttgcttggaa agtctgcctt gcttttaagc aaacagtttg tggctttgat ttgttacggg
1321 ccaatggaca gtcctatgtc tgtgatgtca atggcttcag ttttgtgaaa aattccatga
1381 agtattatga tgactgtgca aaaatacttg gaaatattgt aatgcgagaa cttgctccac
1441 aatttcatat tccatggtca atacccttag aagctgaaga tatcccaatt gtaccaacta
1501 catctggaac tatgatggaa cttagatgtg tcatagctgt tatacgtcat ggggatcgaa
1561 caccaaaaca aaaaatgaaa atggaagtga gacatcagaa attttttgat ctttttgaaa
1621 agtgtgatgg atataaatca gggaaattaa aactcaaaaa accaaaacag ttacaggaag
1681 tgctagatat tgcacgacag cttcttatgg agctagggca aaataatgat tctgaaattg
1741 aagaaaacaa gccaaaactt gaacaactta agactgtatt agagatgtat ggtcattttt
1801 ctggaataaa tcgtaaggtt cagttgacct atctccctca tggttgtcct gaaacatcta
1861 gtgaagagga ggacagccga agagaagaac catctttact tttggttcta aaatggggag
1921 gtgaattaac tcctgcaggc agggtccagg ctgaagaact tggaagagcc ttcaggtgta
1981 tgtatcctgg aggtcaagga gattatgcag gatttcctgg ttgtggttta cttagattac
2041 atagcaccta cagacatgac ctcaaaatat atgcctctga tgaaggacga gtccagatga
2101 ctgcagctgc ttttgcaaag gggcttttag ctttggaagg agagcttaca cccattcttg
2161 ttcaaatggt gaaaagtgca aatatgaacg gtcttttgga tagtgatagt gactctctga
2221 gcagttgtca gcaacgtgtg aaggcaaggc ttcatgaaat acttcagaaa gacagagatt
2281 ttactgctga agattatgaa aagcttactc catctggaag catttctctt atcaaatcaa
2341 tgcatttaat taaaaaccct gtgaagacct gtgataaagt ttattcctta attcagagtt
2401 tgacttctca aatcagacat cgaatggaag atcctaaatc atcagatatt cagctttacc
2461 atagtgaaac attggagctt atgctacgta gatggtccaa gttagagaga gactttaaaa
2521 caaagaatgg aagatatgat attagtaaaa tccctgacat atatgactgt ataaaatatg
2581 atgtccagca taatggttcc ttgaaattag aaaacacaat ggaattatat aggctttcga
2641 aggcattagc agatattgtt atccctcagg aatatggtat aactaaagct gaaaaactgg
2701 agattgccaa aggctactgt actcctctgg ttagaaaaat tcgctcagac cttcagagga
2761 cacaagatga tgacactgta aataaacttc atcctgtgta ttctagaggt gttctgtctc
2821 ctgaacgtca tgttcgtact agattatatt ttaccagtga aagtcatgta cattctttgc
2881 tgtctattct tcgctatggt gccttatgca ataccaatga ttctcagaat gaagatggag
2941 gaatggtgaa ggagatggaa tcaaaggatg aacagtggaa acgagctatg gattatttaa
3001 acgttgtcaa tgagctcaac tacatgactc agattgttat catgctttat gaggatccta
3061 ataaggatct ttcctcagaa gaacgctttc atgttgaatt acactttagt ccgggagcca
3121 aaggttgtga agaagacaaa aatttgccat ctggctatgg atatagacca gcttccagag
3181 agaatgaagg caggagacct tttaaaattg ataatgatga tgaaccacat acttctaaaa
3241 gagatgaagt tgatcgagct gtgatattgt ttaaaccaat ggtatcagag ccaattcata
3301 tacacaggaa gtctccactt ccaagatcta ggaagacggc tacaaatgat gaagagagcc
3361 ccctgagtgt gtctagccca gagggtactg gtacctggct gcattatacc agtggtgtgg
3421 gtactgggcg tcgaagacgc agatcagggg aacaaatcac ttcttcccct gtctccccca
3481 aatcattggc tttcacatcc agtatttttg gctcatggca acaggttgta tctgaaaatg
3541 ctaattacct gagaacacca agaactcttg tggaacagaa gcagaatcct actgtagggt
3601 ctcactgtgc gggcctgttt agcacctcgg tgctcggggg ttcttcaagc gcacctaacc
3661 tacaggatta tgctcgtact catcgtaaaa agctgacctc ttctggctgc atagatgacg
3721 ccacacgcgg ttctgctgtt aaaaggtttt ctatctcatt tgctcgacac ccaaccaatg
3781 aacacctaca cctctatagg tgctggtccg tttcctctgt ggaatttcta ggctccagtg
3841 gctttgaatt gtattccatg gtgccatcta tttgtcctct agaaactctt cataatgccc
3901 tatctttaaa gcaagtggat gaatttcttg cttccattgc ttctccatca tctgacgttc
3961 cacggaagac cgctgaaatt tcctctacag ctttacgttc cagtccaata atgagaaaaa
4021 aagtatcttt aaatacgtat acacctgcaa agatcctccc aacaccacca gctaccttaa
4081 agagcactaa agcaagcagc aaaccagcta caagtggacc ttctagtgca gttgttccta
4141 atacctcatc tcggaaaaag aatataacta gcaaaacaga aacgcatgaa cac
//