LOCUS AK294784 2870 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60110 complete cds, highly similar to Homo
sapiens leucine-rich repeats and IQ motif containing 2 (LRRIQ2),
mRNA.
ACCESSION AK294784
VERSION AK294784.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2870)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2870
/clone="BRAWH3009692"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489408"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 23..2443
/codon_start=1
/note="highly similar to Homo sapiens leucine-rich
repeats and IQ motif containing 2 (LRRIQ2), mRNA"
/protein_id="BAG57909.1"
/transl_table=1
/translation="MAVARVDAALPPGEGSVVNWSGQGLQKLGPNLPCEADIHTLILD
KNQIIKLENLEKCKQLIQLSVANNRLVRMMGVAKLTLLRVLNLPHNSIGCVEGLKELV
HLEWLNLAGNNLKAMEQINSCTALQHLDLSDNNISQIGDLSKLVSLKTLLLHGNIITS
LRMAPAYLPRSLAILSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMATPSIPGFD
YRPYIVSWCLNLRVLDGYVISQKESLKAEWLYSQGKGRAYRPGQHIQLVQYLATVCPL
TSTLGLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELSPLVPVETRASLIPEHSSPVQ
DCQISQESESTFMPVASGLSPLSPTVELRLQGINLGLEDDGVADESVKGLESQVLDKE
EEQPLWAANENSVQMMRSEINTEVNEKAGLLPCPEPTIISAILKDDNHSLTFFPESTE
QKQSDIKKPENTQPENKETISQATSDKLPMILTQRSVALGQDKVALQKLNDAATKLQA
CWRGFYARNYNPQAKDVRYEIRLRRMQEHIVCLTDEIRRLRKERDEERIKKFVQEEAF
RFLWNQVRSLQVWQQTVDQRLSSWHTDVPPISSTLVPSKHPLFTQSQESSCDQNADWF
IASDVAPQEKSLPEFPDSGFHSSLTEQVHSLQHSLDFEKSSTEGSESSIMGNSIDTVR
YGKESDLGDVSEEHGEWNKESSNNEQDNSLLEQYLTSVQQLEDADERTNFDTETRDSK
LHIACFPVQLDTLSDGASVDESHGISPPLQGEISQTQENSKLNAEVQGQQPECDSTFQ
LLHVGVTV"
BASE COUNT 903 a 547 c 601 g 819 t
ORIGIN
1 gtattattag caagcagcaa atatggcggt ggcgcgcgtg gacgcggctt tgcctcccgg
61 agaaggatca gtggtcaatt ggtcaggaca gggactacag aaattaggtc caaatttacc
121 ctgtgaagct gatattcaca ctttgattct ggataaaaat cagattatta aattggaaaa
181 tctggagaaa tgcaaacaat taatacagtt atcagtagct aataatcggc tggttcggat
241 gatgggtgtg gccaagctga cgttgcttcg tgtattaaat ttgcctcata atagcattgg
301 ctgtgtggaa gggctaaagg aactagtaca tctggaatgg ctgaatttgg caggaaataa
361 tcttaaggcc atggaacaga tcaatagctg cacagctcta cagcatctcg atttatcaga
421 caataatata tcccagatag gtgatctatc taaattggta tccctgaaaa ccctgctttt
481 acatggaaac atcatcacct ctcttagaat ggcacctgct tacctaccca gaagtcttgc
541 tatactttct ttggcagaaa atgaaatccg agacttaaat gagatctctt ttttggcatc
601 cttaactgaa ttggaacagt tgtcgattat gaacaatcct tgtgtgatgg caacaccatc
661 catcccagga tttgactatc ggccgtacat cgtcagctgg tgcctaaacc tcagagtcct
721 agatggatat gtgatttctc agaaggaaag tttgaaagct gaatggctct atagtcaagg
781 caaggggaga gcatatcggc ctggccagca catccagctt gtccaatatc tggctacagt
841 ctgccccctc acttctacac taggtcttca aactgcagag gatgccaaac tagagaagat
901 tttgagcaaa cagaggtttc accagaggca gttgatgaac caaagccaaa atgaagagtt
961 gtctcctctt gttcctgttg aaacaagggc atcccttatt cctgagcatt caagccctgt
1021 tcaagattgc cagatatccc aggaaagtga gtctactttt atgccagttg catcaggact
1081 gtctccacta tcacctacag ttgagctgag gctgcagggc attaacttgg gcctagaaga
1141 tgatggtgtt gcagatgaat ctgtgaaagg gctggaaagc caggtgttgg ataaggaaga
1201 ggaacagcct ttatgggctg caaatgagaa ttctgttcaa atgatgagaa gtgaaatcaa
1261 tacagaggta aatgagaaag ctggactatt accttgtcct gagccaacaa taatcagtgc
1321 tatcttgaag gatgataacc acagtcttac attttttcct gagtcaactg agcagaaaca
1381 atcagacata aagaaaccag aaaatacaca accagaaaat aaagaaacca tatctcaagc
1441 aacttcagat aaacttccca tgattttaac ccagagatct gttgctttgg gacaagacaa
1501 agttgccctt cagaaattaa atgatgcagc caccaagctt caggcctgtt ggcggggatt
1561 ttatgccagg aactacaacc ctcaagccaa agatgtgcgt tacgaaatcc ggctacgcag
1621 aatgcaagag cacattgtct gcttaactga tgaaataagg agattacgaa aagaaagaga
1681 tgaagaacgt attaaaaaat ttgtacaaga agaagctttc agattccttt ggaaccaggt
1741 aaggtctcta caggtttggc aacagacagt ggaccagcgt ctaagttcct ggcatactga
1801 tgttcctcct atatcaagta ctcttgtgcc atcgaaacat ccattattta cccaaagcca
1861 ggagtcctct tgtgatcaaa atgctgattg gtttattgct tctgatgtag ctcctcaaga
1921 gaaatcatta ccagaatttc cagactctgg ttttcattcc tctctaacag aacaagttca
1981 ttcattgcag cattctttgg attttgagaa aagttccaca gaaggcagtg aaagctccat
2041 aatggggaat tccattgaca cagtcagata tggcaaagaa tcagatttag gggatgttag
2101 tgaagaacat ggtgaatgga ataaggaaag ctcaaataac gagcaggaca atagtctgct
2161 tgaacagtat ttaacttcag ttcaacagct ggaagatgct gatgagagga ccaattttga
2221 tacagagaca agagatagca aacttcacat tgcttgtttc ccagtacagt tagatacatt
2281 gtctgacggt gcttctgtag atgagagtca tggcatatct cctcctttgc aaggtgaaat
2341 tagccagaca caagagaatt ctaaattaaa tgcagaagtt caagggcagc agccagaatg
2401 tgattctaca tttcagctat tgcatgttgg tgttactgtg tagcatgtct tttgggaggc
2461 agatatccac ttaacttttc ttaaaaatac tttcagttgc ctttgctttt ttttggaggg
2521 aaatactccc tacccctaat tttgttacta cttatataga atttgtattc atgtcttata
2581 tttttcagat tctagatatt gagctgagtt ttcattttga ttttgttagc tttttactta
2641 gctgtaaggt accaaactat ttatattgaa agctatatgc actttatttc ttaactgaat
2701 tgcatcaaca atgttcctgt ttctttcatg tactcattta ctttcaaaaa taagctagaa
2761 tatattaaag aaaatagaaa aaattacctt aaatatataa ataagagaat tttggccctt
2821 ctgtgtctga gaaaattaat tatatagcaa ggaatgaaat ttgataaagc
//