LOCUS AK294760 3443 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61241 complete cds, highly similar to Histone deacetylase 5. ACCESSION AK294760 VERSION AK294760.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3443) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3443 /clone="BRAWH3008139" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000489384" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 301..2946 /codon_start=1 /note="highly similar to Histone deacetylase 5" /protein_id="BAG57895.1" /transl_table=1 /translation="MNSPNESDGMSGREPSLEILPRTSLHSIPVTVEVKPVLPRAMPS SMGGGGGGSPSPVELRGALVGSVDPTLREQQLQQELLALKQQQQLQKQLLFAEFQKQH DHLTRQHEVQLQKHLKQQQEMLAAKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRL EQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHH ASLDQSSPPQSGPPGTPPSYKLPLPGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAER RSSPLLRRKDGTVISTFKKRAVEITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGF TGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPK LSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDGSPHGHASLLQHVLL LEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQAL QQLVMQQQHQQFLEKQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEVLLGE GALTMPREGSTESESTQEDLEEEDEEDDGEEEEDCIQVKDEEGESGAEEGPDLEEPGA GYKKLFSDAQPLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPVKHLFT TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEI QTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSS SAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQ QKLNVGKVLIVDWVGSELVGLGRGG" BASE COUNT 733 a 1097 c 1033 g 580 t ORIGIN 1 agccggagga gccgccgcaa agatggagga gccgtcgagg aggtgctgcc gccgctgccg 61 ccgccgctgc tgccgccgcc gcccgcgaag ccggagctcg agccgcagcg gggatgccgt 121 tctgagtgcc tgactgcctc gccccgaagg atggcctcgg atgggcatta gaggcacggc 181 ggccccgggc tcccgtcccg tccgtctgtc tgttatcgtc tgtctctctt gacatcaccg 241 cagctccacc ccctcccgtc ccagccccca acgccagctt cctgcaggcc cagagccggc 301 atgaactctc ccaacgagtc ggatgggatg tcaggtcggg aaccatcctt ggaaatcctg 361 ccgcggactt ctctgcacag catccctgtg acagtggagg tgaagccggt gctgccaaga 421 gccatgccca gttccatggg gggtgggggt ggaggcagcc ccagccctgt ggagctacgg 481 ggggctctgg tgggctctgt ggaccccaca ctgcgggagc agcaactgca gcaggagctc 541 ctggcgctca agcagcagca gcagctgcag aagcagctcc tgttcgctga gttccagaaa 601 cagcatgacc acctgacaag gcagcatgag gtccagctgc agaagcacct caagcagcag 661 caggagatgc tggcagccaa gcagcagcag gagatgctgg cagccaagcg gcagcaggag 721 ctggagcagc agcggcagcg ggagcagcag cggcaggaag agctggagaa gcagcggctg 781 gagcagcagc tgctcatcct gcggaacaag gagaagagca aagagagtgc cattgccagc 841 actgaggtaa agctgaggct ccaggaattc ctcttgtcga agtcaaagga gcccacacca 901 ggcggcctca accattccct cccacagcac cccaaatgct ggggagccca ccatgcttct 961 ttggaccaga gttcccctcc ccagagcggc ccccctggga cgcctccctc ctacaaactg 1021 cctttgcctg ggccctacga cagtcgagac gacttccccc tccgcaaaac agcctctgaa 1081 cccaacttga aagtgcgttc aaggctaaaa cagaaggtgg ctgagcggag aagcagtccc 1141 ctcctgcgtc gcaaggatgg gactgttatt agcaccttta agaagagagc tgttgagatc 1201 acaggtgccg ggcctggggc gtcgtccgtg tgtaacagcg cacccggctc cggccccagc 1261 tctcccaaca gctcccacag caccatcgct gagaatggct ttactggctc agtccccaac 1321 atccccactg agatgctccc tcagcaccga gccctccctc tggacagctc ccccaaccag 1381 ttcagcctct acacgtctcc ttctctgccc aacatctccc tagggctgca ggccacggtc 1441 actgtcacca actcacacct cactgcctcc ccgaagctgt cgacacagca ggaggccgag 1501 aggcaggccc tccagtccct gcggcagggt ggcacgctga ccggcaagtt catgagcaca 1561 tcctctattc ctggctgcct gctgggcgtg gcactggagg gcgacgggag cccccacggg 1621 catgcctccc tgctgcagca tgtgctgttg ctggagcagg cccggcagca gagcaccctc 1681 attgctgtgc cactccacgg gcagtcccca ctagtgacgg gtgaacgtgt ggccaccagc 1741 atgcggacgg taggcaagct cccgcggcat cggcccctga gccgcactca gtcctcaccg 1801 ctgccgcaga gtccccaggc cctgcagcag ctggtcatgc aacaacagca ccagcagttc 1861 ctggagaagc agaagcagca gcagctacag ctgggcaaga tcctcaccaa gacaggggag 1921 ctgcccaggc agcccaccac ccaccctgag gagacagagg aggagctgac ggagcagcag 1981 gaggtcctgc tgggggaggg agccctgacc atgccccggg agggctccac agagagtgag 2041 agcacacagg aagacctgga ggaggaggac gaggaagacg atggggagga ggaggaggat 2101 tgcatccagg ttaaggacga ggagggcgag agtggtgctg aggaggggcc cgacttggag 2161 gagcctggtg ctggatacaa aaaactgttc tcagatgccc agccgctgca gcctttgcag 2221 gtgtaccagg cgcccctcag cctggccact gtgccccacc aggccctggg ccgtacccag 2281 tcctcccctg ctgcccctgg gggcatgaag agccccccag accagcccgt caagcacctc 2341 ttcaccacag gtgtggtcta cgacacgttc atgctaaagc accagtgcat gtgcgggaac 2401 acacacgtgc accctgagca tgctggccgg atccagagca tctggtcccg gctgcaggag 2461 acaggcctgc ttagcaagtg cgagcggatc cgaggtcgca aagccacgct agatgagatc 2521 cagacagtgc actctgaata ccacaccctg ctctatggga ccagtcccct caaccggcag 2581 aagctagaca gcaagaagtt gctcggcccc atcagccaga agatgtatgc tgtgctgcct 2641 tgtgggggca tcggggtgga cagtgacacc gtgtggaatg agatgcactc ctccagtgct 2701 gtgcgcatgg cagtgggctg cctgctggag ctggccttca aggtggctgc aggagagctc 2761 aagaatggat ttgccatcat ccggccccca ggacaccacg ccgaggaatc cacagccatg 2821 ggattctgct tcttcaactc tgtagccatc accgcaaaac tcctacagca gaagttgaac 2881 gtgggcaagg tcctcatcgt ggactgggta ggcagtgagc tggtggggct gggcaggggc 2941 gggtagagct aggaccaggg tcagccttca ggaagtctcc tcccccagcc ccaccttcaa 3001 gcaccccagt cgtcctcatc ctcgggtgct gggtgtgggt gcagaaggaa gggcgctggg 3061 gctcctgccg gatgactaac gtcacattcc aacagggctc cctcctcaac tatgaaagac 3121 atttagctcc tgttccatct tggccctcac gttgcagttt caagcaacga aggggatttc 3181 ctaccttgaa cggtagtgac gctgccgcca ttgctagtag ccgatatttc ctcccacccc 3241 ctacaattag gagcagactg tataccagga acacaatgag tactttatgg ccacctcgag 3301 tagtaagaac gaggatgtcc atttctgtga acaaaggtgt tgttgcgtga cttacccaag 3361 gccactcagc tggggatgtc ggcactgggt ttcagaccaa ggcttttggc cccagcactc 3421 tgctcttgct accatgggtg ctt //