LOCUS       AK294760                3443 bp    mRNA    linear   HUM 24-JUL-2008
DEFINITION  Homo sapiens cDNA FLJ61241 complete cds, highly similar to Histone
            deacetylase 5.
ACCESSION   AK294760
VERSION     AK294760.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3443)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..3443
                     /clone="BRAWH3008139"
                     /clone_lib="BRAWH3"
                     /db_xref="H-InvDB:HIT000489384"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="brain"
     CDS             301..2946
                     /codon_start=1
                     /note="highly similar to Histone deacetylase 5"
                     /protein_id="BAG57895.1"
                     /transl_table=1
                     /translation="MNSPNESDGMSGREPSLEILPRTSLHSIPVTVEVKPVLPRAMPS
                     SMGGGGGGSPSPVELRGALVGSVDPTLREQQLQQELLALKQQQQLQKQLLFAEFQKQH
                     DHLTRQHEVQLQKHLKQQQEMLAAKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRL
                     EQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHH
                     ASLDQSSPPQSGPPGTPPSYKLPLPGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAER
                     RSSPLLRRKDGTVISTFKKRAVEITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGF
                     TGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPK
                     LSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDGSPHGHASLLQHVLL
                     LEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQAL
                     QQLVMQQQHQQFLEKQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEVLLGE
                     GALTMPREGSTESESTQEDLEEEDEEDDGEEEEDCIQVKDEEGESGAEEGPDLEEPGA
                     GYKKLFSDAQPLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPVKHLFT
                     TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEI
                     QTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSS
                     SAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQ
                     QKLNVGKVLIVDWVGSELVGLGRGG"
BASE COUNT          733 a         1097 c         1033 g          580 t
ORIGIN      
        1 agccggagga gccgccgcaa agatggagga gccgtcgagg aggtgctgcc gccgctgccg
       61 ccgccgctgc tgccgccgcc gcccgcgaag ccggagctcg agccgcagcg gggatgccgt
      121 tctgagtgcc tgactgcctc gccccgaagg atggcctcgg atgggcatta gaggcacggc
      181 ggccccgggc tcccgtcccg tccgtctgtc tgttatcgtc tgtctctctt gacatcaccg
      241 cagctccacc ccctcccgtc ccagccccca acgccagctt cctgcaggcc cagagccggc
      301 atgaactctc ccaacgagtc ggatgggatg tcaggtcggg aaccatcctt ggaaatcctg
      361 ccgcggactt ctctgcacag catccctgtg acagtggagg tgaagccggt gctgccaaga
      421 gccatgccca gttccatggg gggtgggggt ggaggcagcc ccagccctgt ggagctacgg
      481 ggggctctgg tgggctctgt ggaccccaca ctgcgggagc agcaactgca gcaggagctc
      541 ctggcgctca agcagcagca gcagctgcag aagcagctcc tgttcgctga gttccagaaa
      601 cagcatgacc acctgacaag gcagcatgag gtccagctgc agaagcacct caagcagcag
      661 caggagatgc tggcagccaa gcagcagcag gagatgctgg cagccaagcg gcagcaggag
      721 ctggagcagc agcggcagcg ggagcagcag cggcaggaag agctggagaa gcagcggctg
      781 gagcagcagc tgctcatcct gcggaacaag gagaagagca aagagagtgc cattgccagc
      841 actgaggtaa agctgaggct ccaggaattc ctcttgtcga agtcaaagga gcccacacca
      901 ggcggcctca accattccct cccacagcac cccaaatgct ggggagccca ccatgcttct
      961 ttggaccaga gttcccctcc ccagagcggc ccccctggga cgcctccctc ctacaaactg
     1021 cctttgcctg ggccctacga cagtcgagac gacttccccc tccgcaaaac agcctctgaa
     1081 cccaacttga aagtgcgttc aaggctaaaa cagaaggtgg ctgagcggag aagcagtccc
     1141 ctcctgcgtc gcaaggatgg gactgttatt agcaccttta agaagagagc tgttgagatc
     1201 acaggtgccg ggcctggggc gtcgtccgtg tgtaacagcg cacccggctc cggccccagc
     1261 tctcccaaca gctcccacag caccatcgct gagaatggct ttactggctc agtccccaac
     1321 atccccactg agatgctccc tcagcaccga gccctccctc tggacagctc ccccaaccag
     1381 ttcagcctct acacgtctcc ttctctgccc aacatctccc tagggctgca ggccacggtc
     1441 actgtcacca actcacacct cactgcctcc ccgaagctgt cgacacagca ggaggccgag
     1501 aggcaggccc tccagtccct gcggcagggt ggcacgctga ccggcaagtt catgagcaca
     1561 tcctctattc ctggctgcct gctgggcgtg gcactggagg gcgacgggag cccccacggg
     1621 catgcctccc tgctgcagca tgtgctgttg ctggagcagg cccggcagca gagcaccctc
     1681 attgctgtgc cactccacgg gcagtcccca ctagtgacgg gtgaacgtgt ggccaccagc
     1741 atgcggacgg taggcaagct cccgcggcat cggcccctga gccgcactca gtcctcaccg
     1801 ctgccgcaga gtccccaggc cctgcagcag ctggtcatgc aacaacagca ccagcagttc
     1861 ctggagaagc agaagcagca gcagctacag ctgggcaaga tcctcaccaa gacaggggag
     1921 ctgcccaggc agcccaccac ccaccctgag gagacagagg aggagctgac ggagcagcag
     1981 gaggtcctgc tgggggaggg agccctgacc atgccccggg agggctccac agagagtgag
     2041 agcacacagg aagacctgga ggaggaggac gaggaagacg atggggagga ggaggaggat
     2101 tgcatccagg ttaaggacga ggagggcgag agtggtgctg aggaggggcc cgacttggag
     2161 gagcctggtg ctggatacaa aaaactgttc tcagatgccc agccgctgca gcctttgcag
     2221 gtgtaccagg cgcccctcag cctggccact gtgccccacc aggccctggg ccgtacccag
     2281 tcctcccctg ctgcccctgg gggcatgaag agccccccag accagcccgt caagcacctc
     2341 ttcaccacag gtgtggtcta cgacacgttc atgctaaagc accagtgcat gtgcgggaac
     2401 acacacgtgc accctgagca tgctggccgg atccagagca tctggtcccg gctgcaggag
     2461 acaggcctgc ttagcaagtg cgagcggatc cgaggtcgca aagccacgct agatgagatc
     2521 cagacagtgc actctgaata ccacaccctg ctctatggga ccagtcccct caaccggcag
     2581 aagctagaca gcaagaagtt gctcggcccc atcagccaga agatgtatgc tgtgctgcct
     2641 tgtgggggca tcggggtgga cagtgacacc gtgtggaatg agatgcactc ctccagtgct
     2701 gtgcgcatgg cagtgggctg cctgctggag ctggccttca aggtggctgc aggagagctc
     2761 aagaatggat ttgccatcat ccggccccca ggacaccacg ccgaggaatc cacagccatg
     2821 ggattctgct tcttcaactc tgtagccatc accgcaaaac tcctacagca gaagttgaac
     2881 gtgggcaagg tcctcatcgt ggactgggta ggcagtgagc tggtggggct gggcaggggc
     2941 gggtagagct aggaccaggg tcagccttca ggaagtctcc tcccccagcc ccaccttcaa
     3001 gcaccccagt cgtcctcatc ctcgggtgct gggtgtgggt gcagaaggaa gggcgctggg
     3061 gctcctgccg gatgactaac gtcacattcc aacagggctc cctcctcaac tatgaaagac
     3121 atttagctcc tgttccatct tggccctcac gttgcagttt caagcaacga aggggatttc
     3181 ctaccttgaa cggtagtgac gctgccgcca ttgctagtag ccgatatttc ctcccacccc
     3241 ctacaattag gagcagactg tataccagga acacaatgag tactttatgg ccacctcgag
     3301 tagtaagaac gaggatgtcc atttctgtga acaaaggtgt tgttgcgtga cttacccaag
     3361 gccactcagc tggggatgtc ggcactgggt ttcagaccaa ggcttttggc cccagcactc
     3421 tgctcttgct accatgggtg ctt
//