LOCUS AK294737 2887 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53986 complete cds, highly similar to Protein
neurobeachin.
ACCESSION AK294737
VERSION AK294737.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2887)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2887
/clone="BRAWH3005135"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489361"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 126..2345
/codon_start=1
/note="highly similar to Protein neurobeachin"
/protein_id="BAH11865.1"
/transl_table=1
/translation="MFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVV
YSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGR
TYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWED
DQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQ
RDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRM
ALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAM
EAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPV
THVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLI
ANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQI
VFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPR
AVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLISV
SSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVW
QACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY"
BASE COUNT 825 a 633 c 630 g 799 t
ORIGIN
1 aatcgccact gggctcgtca cgacagcctc cttcagctcc aacccggcta attaatcccc
61 actcatggat ataggcacac aaactaaagg ttcttgcata ccctgaggga cttcacggaa
121 aatggatgtt cagcgagata cgagctgtat tttcaagacg ttaccttcta caaaacactg
181 ctttggaagt atttatggca aaccgaacct cagttatgtt taatttccct gatcaagcaa
241 cagtaaaaaa agttgtctat agcttgcctc gggttggagt agggaccagc tatggtctgc
301 cacaagccag gaggatatca ttggccactc ctcgacagct ttataaatct tccaatatga
361 ctcagcgctg gcaaagaagg gaaatttcaa acttcgaata tttgatgttc cttaatacta
421 ttgcaggacg gacatataat gatctgaacc aatatccagt gtttccgtgg gtgttaacca
481 actatgaatc agaagagttg gacctgactc ttccaggaaa cttcagggat ctatcaaagc
541 caattggtgc tttgaacccc aagagagctg tgttttatgc agagcgttat gagacatggg
601 aagatgatca aagcccaccc taccattata atacccatta ttcaacagca acatctactt
661 tatcctggct tgttcgaatt gaacctttca caaccttctt cctcaatgca aatgatggaa
721 aatttgatca tccagatcga accttctcat ccgttgcaag gtcttggaga actagtcaga
781 gagatacttc tgatgtaaag gaactaattc cagagttcta ctacctacca gagatgtttg
841 tcaacagtaa tggatataat cttggagtca gagaagatga agtagtggta aatgatgttg
901 atcttccccc ttgggcaaaa aaacctgaag actttgtgcg gatcaacagg atggccctag
961 aaagtgaatt tgtttcttgc caacttcatc agtggatcga ccttatattt ggctataagc
1021 agcgaggacc agaagcagtt cgtgctctga atgtttttca ctacttgact tatgaaggct
1081 ctgtgaacct ggatagtatc actgatcctg tgctcaggga ggccatggag gcacagatac
1141 agaactttgg acagacgcca tctcagttgc ttattgagcc acatccgcct cggagctctg
1201 ccatgcacct gtgtttcctt ccacagagtc cgctcatgtt taaagatcag atgcaacagg
1261 atgtgataat ggtgctgaag tttccttcaa attctccagt aacccatgtg gcagccaaca
1321 ctctgcccca cttgaccatc cccgcagtgg tgacagtgac ttgcagccga ctctttgcag
1381 tgaatagatg gcacaacaca gtaggcctca gaggagctcc aggatactcc ttggatcaag
1441 cccaccatct tcccattgaa atggatccat taatagccaa taattcaggt gtaaacaaac
1501 ggcagatcac agacctcgtt gaccagagta tacaaatcaa tgcacattgt tttgtggtaa
1561 cagcagataa tcgctatatt cttatctgtg gattctggga taagagcttc agagtttatt
1621 ctacagaaac agggaaattg actcagattg tatttggcca ttgggatgtg gtcacttgct
1681 tggccaggtc cgagtcatac attggtgggg actgctacat cgtgtccgga tctcgagatg
1741 ccaccctgct gctctggtac tggagtgggc ggcaccatat cataggagat aaccctaaca
1801 gcagtgacta tccggcacca agagccgtcc tcacaggcca tgaccatgaa gttgtctgtg
1861 tttctgtctg tgcagaactt gggcttgtta tcagtggtgc taaagagggc ccttgccttg
1921 tccacaccat cactggagat ttgctgagag cccttgaagg accagaaaac tgcttattcc
1981 cacgcttgat atctgtctcc agcgaaggcc actgtatcat atactatgaa cgagggcgat
2041 tcagtaattt cagcattaat gggaaacttt tggctcaaat ggagatcaat gattcaacac
2101 gggccattct cctgagcagt gacggccaga acctggtcac cggaggggac aatggggtag
2161 tagaggtctg gcaggcctgt gacttcaagc aactgtacat ttaccctgga tgtgatgctg
2221 gcattagagc aatggacttg tcccatgacc agaggactct gatcactggc atggcttctg
2281 gtagcattgt agcttttaat atagatttta atcggtggca ttatgagcat cagaacagat
2341 actgaagata aaggaagaac caaaagccaa gttaaagctg agagcacaag tgctgcatgg
2401 aaaggcaata tctctggtgg aaaaaactcg tctacatcga cctccgtttg tacattccat
2461 cacacccagc aatagctgta cattgtagtc agcaaccatt ttactttgtg tgttttttca
2521 cgactgaaca ccagctgcta tcaagcaagc ttatatcatg taaattatat gaattaggag
2581 atgttttggt aattatttca tatattgttg tttattgaga aaaggttgta ggatgtgtca
2641 caagagactt ttgacaattc tgaggaacct tgtgtccagt tgttacaaag tttaagcttt
2701 gaacctaacc tgcatcccat ttccagcctc ttttcaagct gagaaaaaaa aaaaaaacac
2761 gtttgatact ttgtacatca gatgcatctt atttaaaagg gatacttttg taaaagtaaa
2821 accttgtata aagaacaaaa tgtttcttaa ttttattgtg gagttacaac ttgcatgttc
2881 cttactc
//