LOCUS AK294650 1388 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53782 complete cds, highly similar to Homo
sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript
variant 1, mRNA.
ACCESSION AK294650
VERSION AK294650.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1388)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1388
/clone="BRAWH2011375"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000489274"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 176..1138
/codon_start=1
/note="highly similar to Homo sapiens FERM and PDZ domain
containing 2 (FRMPD2), transcript variant 1, mRNA"
/protein_id="BAG57825.1"
/transl_table=1
/translation="MTSIPFPGDRLLQVDGVILCGLTHKQAVQCLKGPGQVARLVLER
RVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGF
SFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQEVL
HLLRGAPQEVTLLLCRPPPGALPEMEQEWQTPELSADKEFTRATCTDSCTSPILDQED
SWRDSASPDAGEGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPHLCKLHQE
RDESTLATSLEKDVRQNCYSVCDIMRLGRYSFSSPLTRLSTDIF"
BASE COUNT 329 a 359 c 380 g 320 t
ORIGIN
1 gatgtgcctg agaagaaggg agtgagactg ctcagagagg caggattcct gctgactcca
61 gggggacacc tggcacctca gcttcctttc ccacttctcc aggctgcatg gaggggtgcc
121 gggcaggggc ctcctggaag ggaacctcct gcagcctcaa gcaccaggtc atgacatgac
181 atctatccct ttcccaggtg accgactcct gcaggtggat ggagtgattc tgtgcggcct
241 cacccacaag caggctgtgc agtgcctgaa gggtcctggg caggttgcaa gactggtctt
301 agagagaaga gtccccagga gtacacagca gtgtccttct gctaatgaca gcatgggaga
361 tgaacgcacg gctgtttcct tggtaacagc cttgcctggc aggccttcga gctgtgtctc
421 ggtgacagat ggtcctaagt ttgaagtcaa actaaaaaag aatgccaatg gtttgggatt
481 cagtttcgtg cagatggaga aagagagctg cagccatctc aaaagtgatc ttgtgaggat
541 taagaggctc tttccggggc agccagctga ggagaatggg gccattgcag ctggtgacat
601 tatcctggcc gtgaatggaa ggtccacgga aggcctcatc ttccaggagg tgctgcattt
661 actgagaggg gccccacagg aagtcacgct cctcctttgc cgaccccctc caggtgcgct
721 gcctgagatg gagcaggaat ggcagacacc tgaactctca gctgacaaag aattcaccag
781 ggcaacatgt actgactcgt gtaccagccc catcctggat caagaggaca gctggaggga
841 cagtgcctcc ccagatgcag gggaaggcct gggtctcagg ccagagtctt cccaaaaggc
901 catcagagag gcacaatggg gccaaaacag agagagacct tgggccagtt ccttgacaca
961 ttctcctgag tcccaccctc atttatgcaa acttcaccaa gaaagggatg aatcaacatt
1021 ggcgacctct ttggaaaagg atgtgaggca aaactgctat tcagtttgtg atatcatgag
1081 acttggaaga tattccttct catctcctct aaccagactt tcgacagata ttttctgagc
1141 accttctctg catgtctgca gtgctgtgta aaatgcccta cctttgcatg gactattctt
1201 tctaatcaag aggcgtgtgt ggcgaacttg gggcagcccc tggaagtctt gttctttgac
1261 cattacgtct gcggctgcat caccagataa tgagcttcac cactcgtctg cctcctgtgt
1321 ccttccgcgg ggagtaaatg tcacttcagc ttgccgcatc tctaaatagg caaattttca
1381 gtgctcag
//