LOCUS AK294621 1996 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54649 complete cds, highly similar to
Chondroitin sulfate proteoglycan 5 precursor.
ACCESSION AK294621
VERSION AK294621.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1996)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1996
/clone="BRAWH2006802"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000489245"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 669..1955
/codon_start=1
/note="highly similar to Chondroitin sulfate proteoglycan
5 precursor"
/protein_id="BAH11826.1"
/transl_table=1
/translation="MPPAIPEATEASGPPSPTPGDKLSPASELPKESPLEVWLNLGGS
TPDPQGPELTYPFQGTLEPQPASDIIDIDYFEGLDGEGRGADLGSFPGSPGTSENHPD
TEGETPSWSLLDLYDDFTPFDESDFYPTTSFYDDLDEEEEEEEDDKDAVGGGDLEDEN
ELLVPTGKPGLGPGTGQPTSRWHAVPPQHTLGSVPGSSIALRPRPGEPGRDLASSENG
TECRSGFVRHNGSCRSVCDLFPSYCHNGGQCYLVENIGAFCRCNTQDYIWHKGMRCES
IITDFQVMCVAVGSAALVLLLLFMMTVFFAKKLYLLKTENTKLRRTNKFRTPSELHND
NFSLSTIAEGSHPNVRKLCNTPRTSSPHARALAHYDNVICQDDPSAPHKIQEVLKSCL
KEEESFNIQNSMSPKLEGGKGDQADLDVNCLQNNLT"
BASE COUNT 463 a 551 c 592 g 390 t
ORIGIN
1 agtccagtga ggaataactg tagataagat gagatgatgg gcattaagtg taactgctga
61 gaagccttca tagagggaaa ggtgataaga actgagtttt tctggcatga ggagtttacc
121 aggcaggaga ggtggagacg ctaggctagg caaataggct gcagccatag ttctgctgag
181 aaacaggttt tgaaccaagg caactccatc tggagatatg tatcagaaag attaggagat
241 agaatctcca tcttggtcac ttatttggtc ttctaagaca gcaatgggac cgtctcttaa
301 atactggagt tgtcctatct ccttgggctg ataccctgaa ctgtcatttg gcgcgtgagg
361 cgggcagcgc ggttgaggcc gaagagctgg tgaagggcag cccggcgtgg gagccgcctg
421 ccaacgacac gcgggaagaa gccggcccac cagcggctgg ggaagatgag gcgtcgtgga
481 cggcgcccgg tggcgagctg gccgggccag aataggtgct gcaggagtcg gctgcggtga
541 ccggcaccgc ctggctggaa gctgacagcc caggcctggg aggagtgacc gcagaggcgg
601 gcagcggcga tgcccaggcc cttccagcta cgctccaggc tccccacgag gtcctcgggc
661 agtcaatcat gccccctgcc attcctgagg ctacagaggc cagcgggcca ccctccccca
721 cccccggcga caagctgagc ccagcttctg aactccccaa ggagagcccc ttggaggttt
781 ggctgaacct ggggggcagc acacccgacc ctcaagggcc agagctgact tacccatttc
841 agggcaccct ggagccccaa ccggcatcag atatcattga catcgactac ttcgaaggac
901 tggatggtga gggtcgtggc gcagatctgg ggagcttccc agggtcacca ggaacctcag
961 agaaccaccc tgatactgag ggagagaccc cttcctggag cctgcttgac ttatacgatg
1021 atttcacccc cttcgatgaa tctgatttct accccaccac atccttttat gatgacttgg
1081 atgaagagga ggaggaagag gaggatgaca aagatgcagt aggaggtgga gacctagaag
1141 atgaaaatga gcttctagtg cccactggga agcctggtct ggggcccggg acaggccagc
1201 ccaccagtcg gtggcatgct gtccctccac agcacactct ggggtcggtc cccggcagca
1261 gcatcgccct caggccccgc ccaggagagc caggcaggga cttggcctcc agtgaaaatg
1321 gcactgagtg ccgcagtggc tttgtgcggc ataacggctc ctgccggtca gtgtgcgacc
1381 tcttcccaag ttactgtcac aatggcggcc agtgctacct ggtggagaac ataggggcct
1441 tctgcaggtg caacacgcag gactacatct ggcacaaggg gatgcgctgc gagtccatca
1501 tcaccgactt ccaggtgatg tgcgtggccg tgggctcggc tgccctcgtc ctgctcctgc
1561 tcttcatgat gacggtgttc tttgccaaga agctctacct gctcaagacg gagaatacca
1621 agctgcgtag gaccaacaaa ttccggaccc catctgagct ccacaatgat aacttctccc
1681 tctccaccat tgccgagggc tctcacccaa atgtaaggaa actttgcaac actccccgta
1741 cctcctcccc ccatgcccgt gccttggctc actatgataa cgttatctgt caggatgatc
1801 ctagtgctcc ccacaaaatc caggaggttc tcaagtcctg cctgaaagag gaggagtcat
1861 ttaacatcca gaactccatg tcgcccaaac ttgagggtgg caaaggtgac caggctgact
1921 tggatgtgaa ctgtcttcag aataatttaa cctaaagcag agcaagaaga gaggaagcgg
1981 gggtagtggg tggggg
//