LOCUS AK294603 1989 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58772 complete cds, highly similar to Fragile
X mental retardation syndrome-related protein 1.
ACCESSION AK294603
VERSION AK294603.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1989)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1989
/clone="BRAWH2004031"
/clone_lib="BRAWH2"
/db_xref="H-InvDB:HIT000489227"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 218..1582
/codon_start=1
/note="highly similar to Fragile X mental retardation
syndrome-related protein 1"
/protein_id="BAG57790.1"
/transl_table=1
/translation="MMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKC
TVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDM
HLRSIRTKLMLMSGNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQAR
KVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKV
IQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEV
EQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDEL
SDWSLAGEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPY
SLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLG
KRCD"
BASE COUNT 652 a 344 c 491 g 502 t
ORIGIN
1 ctttgcggtt ccaacatggc ggagctgacg gtggaggttc gcggctctaa cggggctttc
61 tacaagttgg caaccagaac gccaggttcc atttaatgaa gttagattac caccaccacc
121 tgatataaaa aaagaaatta gtgaaggaga tgaagtagag gtatattcaa gagcaaatga
181 ccaagagcca tgtgggtggt ggttggctaa agttcggatg atgaaaggag aattttatgt
241 cattgaatat gctgcttgtg acgctactta caatgaaata gtcacatttg aacgacttcg
301 gcctgtcaat caaaataaaa ctgtcaaaaa aaataccttc tttaaatgca cagtggatgt
361 tcctgaggat ttgagagagg cgtgtgctaa tgaaaatgca cataaagatt ttaagaaagc
421 agtaggagca tgcagaattt tttaccatcc agaaacaaca cagctaatga tactgtctgc
481 cagtgaagca actgtgaaga gagtaaacat cttaagtgac atgcatttgc gaagtattcg
541 tacgaagttg atgcttatgt ccggaaatga agaggccact aagcatttag aatgcacaaa
601 acaacttgca gcagcttttc atgaggaatt tgttgtgaga gaagatttaa tgggcctggc
661 aataggaaca catggtagta acatccagca agctaggaag gttcctggag ttaccgccat
721 tgagctagat gaagatactg gaacattcag aatctacgga gagagtgctg atgctgtaaa
781 aaaggctaga ggtttcttgg aatttgtgga ggattttatt caggttccta ggaatctcgt
841 tggaaaagta attggaaaaa atggcaaagt tattcaagaa atagtggaca aatctggtgt
901 ggttcgagtg agaattgaag gggacaatga aaataaatta cccagagaag acggtatggt
961 tccatttgta tttgttggca ctaaagaaag cattggaaat gtgcaggttc ttctagagta
1021 tcatattgcc tatctaaagg aagtagaaca gctaagaatg gaacgcctac agattgatga
1081 acagctgcga cagattggtt ctaggtctta tagcggaaga ggcagaggtc gtcggggacc
1141 taattacacc tccggttatg gtacaaattc tgagctgtct aacccctctg aaacggaatc
1201 tgagcgtaaa gacgagctga gtgattggtc attggcagga gaagatgatc gagacagccg
1261 acatcagcgt gacagcagga gacgcccagg aggaagaggc agaagtgttt cagggggtcg
1321 aggtcgtggt ggaccacgtg gtggcaaatc ctccatcagt tctgtgctca aagatccaga
1381 cagcaatcca tacagcttac ttgataatac agaatcagat cagactgcag acactgatgc
1441 cagcgaatct catcacagta ctaaccgtcg taggcggtct cgtagacgaa ggactgatga
1501 agatgctgtt ctgatggatg gaatgactga atctgataca gcttcagtta atgaaaatgg
1561 gctaggcaaa agatgtgatt gaagagcatg gtccttcaga aaaggcaata aacggcccaa
1621 ctagtgcttc tggcgatgac atttctaagc tacagcgtac tccaggagaa gaaaagatta
1681 ataccttaaa agaagaaaac actcaagaag cagcagtcct gaatggtgtt tcataaactg
1741 aagaagttcc tagtttacag ttcttttaca ttacatttac aatagtgctt gtacaagctt
1801 gccaaagata gaatatggat cgccagtctt tacatcgcac tttcagttcc tccatttgga
1861 attcaaaaag gggagggatc ctgaagaaat catatgttaa acatactttg acacctactg
1921 tgttataaaa tatatcatca gatgtgcctt gagaatagta tatgtaacat taaaaaaaag
1981 ttgctggct
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