LOCUS AK294569 2504 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56069 complete cds.
ACCESSION AK294569
VERSION AK294569.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2504)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2504
/clone="BRAMY4001991"
/clone_lib="BRAMY4"
/db_xref="H-InvDB:HIT000489193"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 18..2405
/codon_start=1
/protein_id="BAG57763.1"
/transl_table=1
/translation="MVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVH
CKNSESVYSGCLHLVSDLLQALFKEAYSLQKQLMELPDMVCMDPLVDDNDDILNMVIV
IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSF
HSCLQLAEQMTQSDAQDNADYRLFQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQ
LYLQIHSKFPPSLYATRISKAHQEEIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDL
PCELQFPQCLLLVVVMDKLPSQPKEVQTLWCTDSQVSETTTRISLLKAVFYSFEQCSG
ELSLPVHLQGLKSKGKAEVAVTLYQHVCVHLCTFITSFHPSLFAELDAALLNAVLSAN
MITSLLAMDAWCFLARYGTAELCAHHVTIVAHLIKSCPGECYQLINLSILLKRLFFFM
APPHQLEFIQKFSPKEAENLPLWQHISFQALPPELREQTVHEVTTVGTAECRKWLSRS
RTLGELESLNTVLSALLAVCNSAGEALDTGKQTAIIEVVSQLWAFLNIKQVADQPYVQ
QTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLELPDYVRLAMLDFVSSLGKLFIP
EAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFAEGTNHEEIVPQCLSSEETKN
KVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVEEAKRSSLQPYAKRARQEF
PWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQERMDKLKRYIHTLG"
BASE COUNT 688 a 534 c 519 g 763 t
ORIGIN
1 ttccttattc acagacaatg gtgcagctct taggagctct cacaggatgt gttcagcata
61 tctgtgccac acaggaatcc atcattttgg aaaatattca gagtctcccc tcctcagtcc
121 ttcatataat taaaagcaca tttgtgcatt gtaagaatag tgaatctgtg tattctgggt
181 gtttacacct agtttcagac cttctccagg ctcttttcaa ggaggcctat tctcttcaaa
241 agcagttaat ggaactgccg gacatggttt gcatggaccc tttagtagat gacaatgatg
301 atattttgaa tatggtaata gttattcatt ctttattgga tatctgctct gttatttcca
361 gtatggacca tgcatttcat gccaatactt ggaagtttat aattaagcag agccttaagc
421 accagtccat aataaaaagc cagttgaaac acaaagatat aattactagc ttgtgtgaag
481 acattctttt ctccttccat tcttgtttac agttagctga gcagatgaca cagtcagatg
541 cacaggataa tgctgactac agattatttc agaaaacact caaattgtgt cgtttttttg
601 ccaactccct tttgcactac gctaaggaat ttcttccttt cctctctgat tcttgctgta
661 ctttgcacca actgtatctt cagatacaca gcaagtttcc tccaagcctt tatgctacca
721 ggatttctaa agcacaccaa gaggaaatag caggtgcttt cctagtgaca ctggatccac
781 ttatcagtca gctgctcaca tttcagcctt tcatgcaggt ggttttggac agtaaattag
841 acctgccatg tgaactgcag tttccacaat gtcttcttct ggttgttgtc atggataagc
901 tgccatctca gcctaaggaa gtgcaaaccc tgtggtgcac agacagccag gtctcagaaa
961 cgacaaccag gatatctcta ctcaaagccg ttttctacag ttttgagcag tgttctggtg
1021 aactctctct acctgttcat ttacagggat taaagagtaa ggggaaagct gaggtggctg
1081 tcaccttgta tcagcatgtt tgtgttcatc tgtgtacatt tattacttcc tttcatccct
1141 cactgtttgc tgaactggat gctgctctgc tgaatgctgt acttagtgct aatatgatca
1201 cctctttgtt agctatggat gcatggtgct tccttgctcg atatgggact gctgaactgt
1261 gtgcacacca tgtcaccata gtggctcatc tgataaagtc atgccctgga gaatgttatc
1321 aactcatcaa cctatcaata ctgttgaagc gtctcttttt cttcatggca ccaccccatc
1381 agctggagtt tatccagaaa ttttccccaa aagaagcaga aaatctgcct ctgtggcaac
1441 atatttcctt ccaggcgtta cctcctgagc ttagggaaca aactgtccat gaggtcacca
1501 cagtaggcac tgcagaatgc aggaaatggc tgagcaggag tcgtactttg ggagaactag
1561 aatctctgaa cacagtactg tctgctttgc ttgcggtatg taattctgct ggtgaagctt
1621 tggatacagg aaaacaaact gcaattatcg aagttgtgag tcagctttgg gcttttttaa
1681 acattaaaca ggtagcagat caaccttatg ttcaacagac attcagcctt ttacttccac
1741 tgttgggatt tttcattcaa actctagatc ctaaactgat acttcaggca gtaactttgc
1801 agacctcgct acttaaatta gagcttcctg actatgttcg tttggcaatg ttggattttg
1861 tatcttcttt aggaaaactt tttatacctg aagctatcca ggacagaatt ctgcccaacc
1921 tgtcctgtat gtttgcctta ctgctagctg acaggagttg gctgctagaa caacatacct
1981 tggaggcgtt tactcagttc gctgagggaa caaatcatga agagatagtt ccacagtgtc
2041 tcagttctga agaaactaag aacaaagttg tatcctttct ggagaagact gggtttgtag
2101 atgaaactga agctgccaaa gtggaacgtg tgaaacagga aaaaggtatt ttctgggaac
2161 cctttgctaa tgtgactgta gaagaagcaa agaggtcatc tttacagcct tatgcaaaaa
2221 gagctcgtca ggagttcccc tgggaagaag agtacaggtc agcgctgcat acaatagcag
2281 gggctttgga agcaactgag tcactactcc aaaagggtcc tgctccagcc tggctttcaa
2341 tggaaatgga ggcgctccaa gaaaggatgg ataagctaaa acgttacata catactctag
2401 ggtgaaactt atcactaggc agaactgggt ttgatgcttt gtcaactgaa aatacttatg
2461 tctgtacatt ttctaacaga tataaaacaa attttgtaaa gttg
//