LOCUS AK294560 4288 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53390 complete cds, highly similar to Homo
sapiens papilin, proteoglycan-like sulfated glycoprotein (PAPLN),
mRNA.
ACCESSION AK294560
VERSION AK294560.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4288)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4288
/clone="BRAMY4000993"
/clone_lib="BRAMY4"
/db_xref="H-InvDB:HIT000489184"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 134..3943
/codon_start=1
/note="highly similar to Homo sapiens papilin,
proteoglycan-like sulfated glycoprotein (PAPLN), mRNA"
/protein_id="BAG57757.1"
/transl_table=1
/translation="MRLPQAEMRLLLLVPLLLAPAPGSSAPKVRRQSDTWGPWSQWSP
CSRTCGGGVSFRERPCYSQRRDGGSSCVGPARSHRSCRTESCPDGARDFRAEQCAEFD
GAEFQGRRYRWLPYYSAPNKCELNCIPKGENFYYKHREAVVDGTPCEPGKRDVCVDGS
CRVVGCDHELDSSKQEDKCLRCGGDGTTCYPVAGTFDANDLSRGYNQILIVPMGATSI
LIDEAAASRNFLAVKNVRGEYYLNGHWTIEAARALPAASTILHYERGAEGDLAPERLH
ARGPTSEPLVIELISQEPNPGVHYEYHLPLRRPSPGFSWSHGSWSDCSAECGGGHQPR
LVFCTIDHEAYPDHMCQRQPRPADRRSCNLHPCPETKRWKAGPWAPCSASCGGGSQSR
SVYCISSDGAGIQEAVEEAECAGLPGKPPAIQACNLQRCAAWSPEPWGECSVSCGVGV
RKRSVTCRGERGSLLHTAACSLEDRPPLTEPCVHEDCPLLSDQAWHVGTWGLCSKSCS
SGTRRRQVICAIGPPSHCGSLQHSKPVDVEPCNTQPCHLPQEVPSMQDVHTPASNPWM
PLGPQESPASDSRGQWWAAQEHPSARGDHRGERGDPRGDQGTHLSALGPAPSLQQPPY
QQPLRSGSGPHDCRHSPHGCCPDGHTASLGPQWQGCPGAPCQQSRYGCCPDRVSVAEG
PHHAGCTKSYGGDSTGGRPRSRAVASTVHNTHQPQAQQNEPSECRGSQFGCCYDNVAT
AAGPLGEGCVGQPSHDWAARWYFVASVGQCNRFWYGGCHGNANNFASEQECMSSCQGS
LHGPRRPQPGASGRSTHTDGGGSSPAGEQEPSQHRTGAAVQRKPWPSGGLWRQDQQPG
PGEAPHTQAFGEWPWGQELGSRAPGLGGDAGSPAPPFHSSSYRISLAGVEPSLVQAAL
GQLVRLSCSDDTAPESQAAWQKDGQPISSDRHRLQFDGSLIIHPLQAEDAGTYSCGST
RPGRDSQKIQLRIIGGDMAVLSEAELSRFPQPRDPAQDFGQAGAAGPLGAIPSSHPQP
ANRLRLDQNQPRVVDASPGQRIRMTCRAEGFPPPAIEWQRDGQPVSSPRHQLQPDGSL
VISRVAVEDGGFYTCVAFNGQDRDQRWVQLRVLGELTISGLPPTVTVPEGDTARLLCV
VAGESVNIRWSRNGLPVQADGHRVHQSPDGTLLIYNLRARDEGSYTCSAYQGSQAVSR
STEVKVVSPAPTAQPRDPGRDCVDQPELANCDLILQAQLCGNEYYSSFCCASCSRFQP
HAQPIWQ"
BASE COUNT 789 a 1377 c 1344 g 778 t
ORIGIN
1 gcggtgcacc gaggcgcacc cggctgtcct gttgcgggtc tcctggtcac ctgtgggcca
61 tagggagaga cgcgcccaca cactctcgcc cgcgcccagg acagctgcgg gagccccggg
121 ccgctctaac ccaatgcgtc tcccgcaggc tgagatgcgg ctgctcctgc tcgtgccgct
181 gctgctggct ccagcgcccg ggtcctcggc tcccaaggtg aggcggcaga gtgacacctg
241 gggaccctgg agccagtgga gcccctgcag ccggacctgt ggagggggtg tcagcttccg
301 ggagcgcccc tgctactccc agaggagaga tggaggctcc agctgcgtgg gccccgcccg
361 gagccaccgc tcttgtcgca cggagagctg ccccgacggc gcccgggact tccgggccga
421 gcagtgcgcg gagttcgacg gagcggagtt ccaggggcgg cggtatcggt ggctgcccta
481 ctacagcgcc ccaaacaagt gtgaactgaa ctgcattccc aagggggaga acttctacta
541 caagcacagg gaggctgtgg ttgatgggac accctgcgag cctggcaaga gggatgtctg
601 tgtggatggc agctgccggg ttgtcggctg tgatcacgag ctggactcgt ccaagcagga
661 ggacaagtgt ctgcggtgtg ggggtgacgg cacgacctgc taccccgtcg caggcacctt
721 tgacgctaat gacctcagcc gaggctacaa ccagatcctc atagttccca tgggtgccac
781 cagcatcctc atcgacgagg ctgctgccag caggaacttc ctggctgtga agaatgttcg
841 tggggaatac tacctcaatg ggcactggac catcgaggcg gcccgggccc tgccagcagc
901 cagcaccatc ctgcattacg agcggggtgc tgagggggac ctggcccctg agcgactcca
961 tgcccggggc cccacctcgg agcccctggt catcgagctc atcagccagg agcccaaccc
1021 cggtgtgcac tatgagtacc acctgcccct gcgccgcccc agccccggct tcagctggag
1081 ccacggctca tggagtgact gcagcgcgga gtgtggcgga ggtcaccagc cccgcctggt
1141 gttctgcacc atcgaccatg aggcctaccc cgaccacatg tgccagcgcc agccacggcc
1201 agctgaccgg cgttcctgca atcttcaccc ttgcccggag accaagcgct ggaaggcagg
1261 gccatgggca ccctgctcag cctcctgtgg aggaggctcc cagtcccgct ccgtgtactg
1321 catctcgtct gacggggccg gcatccagga ggccgtggag gaggctgagt gtgccgggct
1381 gcctgggaag ccccctgcca ttcaggcctg taacctgcag cgctgtgcag cctggagccc
1441 ggagccctgg ggagagtgtt ctgtcagttg tggcgttggc gtccggaagc ggagcgttac
1501 ttgccggggt gaaaggggtt ctttgctcca taccgcagcg tgctccttgg aagaccggcc
1561 acctctgact gagccctgtg tgcatgagga ctgccccctc ctcagtgacc aggcctggca
1621 tgttggcacc tggggtctat gctccaagag ctgcagctcg ggcactcgga ggcgacaggt
1681 catctgtgcc attgggccgc ccagccactg cgggagcctg cagcactcca agcctgtgga
1741 tgtggagcct tgtaacacgc agccctgtca tctcccccag gaggtcccca gcatgcagga
1801 tgtgcacacc cctgccagca acccctggat gccgttgggc cctcaggagt cccctgcctc
1861 agactccaga ggccagtggt gggcagccca ggaacacccc tcagccaggg gtgaccacag
1921 gggagaacga ggtgacccca ggggcgacca aggcacccac ctgtcagccc tgggccccgc
1981 tccctctctg cagcagcccc cataccagca acccctgcgg tcgggctcag ggccccacga
2041 ctgcagacac agtcctcacg ggtgctgccc cgatggccac acggcatctc tcgggcctca
2101 gtggcaaggc tgccctgggg ccccctgtca gcagagcagg tacgggtgct gccctgacag
2161 ggtatctgtc gctgaggggc cccatcacgc tggctgcaca aagtcgtatg gtggtgacag
2221 caccgggggc aggcccaggt caagggcagt ggcttctaca gtccacaaca cccaccagcc
2281 ccaggcccag cagaatgagc ccagtgagtg ccggggctcc cagtttggct gttgctatga
2341 caacgtggcc actgcagccg gtcctcttgg ggaaggctgt gtgggccagc ccagccatga
2401 ctgggctgcc cgctggtact tcgttgcctc tgtgggccaa tgtaaccgct tctggtatgg
2461 cggctgccat ggcaatgcca ataactttgc ctcggagcaa gagtgcatga gcagctgcca
2521 gggatctctc catgggcccc gtcgtcccca gcctggggct tctggaagga gcacccacac
2581 ggatggtggc ggcagcagtc ctgcaggcga gcaggaaccc agccagcaca ggacaggggc
2641 cgcggtgcag agaaagccct ggccttctgg tggtctctgg cggcaagacc aacagcctgg
2701 gccaggggag gccccccaca cccaggcctt tggagaatgg ccatgggggc aggagcttgg
2761 gtccagggcc cctggactgg gtggagatgc cggatcacca gcgccaccct tccacagctc
2821 ctcctacagg attagcttgg caggtgtgga gccctcgttg gtgcaggcag ccctggggca
2881 gttggtgcgg ctctcctgct cagacgacac tgccccggaa tcccaggctg cctggcagaa
2941 agatggccag cccatctcct ctgacaggca caggctgcag ttcgacggat ccctgatcat
3001 ccaccccctg caggcagagg acgcgggcac ctacagctgt ggcagcaccc ggccaggccg
3061 cgactcccag aagatccaac ttcgcatcat agggggtgac atggccgtgc tgtctgaggc
3121 tgagctgagc cgcttccctc agcccaggga cccagctcag gactttggcc aagcgggggc
3181 tgctgggccc ctgggggcca tcccctcttc acacccacag cctgcaaaca ggctgcgttt
3241 ggaccagaac cagccccggg tggtggatgc cagtccaggc cagcggatcc ggatgacctg
3301 ccgtgccgaa ggcttcccgc ccccagccat cgagtggcag agagatgggc agcctgtctc
3361 ttctcccaga caccagctgc agcctgatgg ctccctggtc attagccgag tggctgtaga
3421 agatggcggc ttctacacct gtgtcgcttt caatgggcag gaccgagacc agcgatgggt
3481 ccagctcaga gttctggggg agctgacaat ctcaggactg ccccctactg tgacagtgcc
3541 agagggtgat acggccaggc tattgtgtgt ggtagcagga gaaagtgtga acatcaggtg
3601 gtccaggaac gggctacctg tgcaggctga tggccaccgt gtccaccagt ccccagatgg
3661 cacgctgctc atttacaact tgcgggccag ggatgagggc tcctacacgt gcagtgccta
3721 ccaggggagc caggcagtca gccgcagcac cgaggtgaag gtggtctcac cagcacctac
3781 cgcccagccc agggaccctg gcagggactg cgtcgaccag ccagagctgg ccaactgtga
3841 tttgatcctg caggcccagc tttgtggcaa tgagtattac tccagcttct gctgtgccag
3901 ctgttcacgt ttccagcctc acgctcagcc catctggcag tagggatgaa ggctagttcc
3961 agccccagtc caaaatagtt catagggcta gggagaaagg aagatggact cttggcttcc
4021 tctctctggc tggcaaaggg agttatcttc tggaatacat tagctctttc aaaaacccac
4081 ccagtgttta gcctcaacgg cagccagtta ccagcttctc tctgtagcct tcagcagtgt
4141 ttgcatctct gacataacca caggctgctg ttttcaagaa gagcaatctg tttggataag
4201 aaaaaccttt actttacagc ttccctttat aatttgttac acaggaatag ttaaatgcat
4261 ttgtttgttt gttttttgag actgtctc
//