LOCUS AK294544 3603 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50140 partial cds, highly similar to
Adenomatous polyposis coli protein.
ACCESSION AK294544
VERSION AK294544.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3603)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3603
/clone="BRAMY3019019"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489168"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 198..>3603
/codon_start=1
/note="highly similar to Adenomatous polyposis coli
protein"
/protein_id="BAH11802.1"
/transl_table=1
/translation="MYASLGSGPVAPLPASVPPSVLGSWSTGGSRSCVRQETKSPGGA
RTSGHWASVWQEVLKQLQGSIEDEAMASSGQIDLLERLKELNLDSSNFPGVKLRSKMS
LRSYGSREGSVSSRSGECSPVPMGSFPRRGFVNGSRESTGYLEELEKERSLLLADLDK
EEKEKDWYYAQLQNLTKRIDSLPLTENFSLQTDMTRRQLEYEARQIRVAMEEQLGTCQ
DMEKRAQRSSQNKHETGSHDAERQNEGQGVGEINMATSGNGQGSTTRMDHETASVLSS
SSTHSAPRRLTSHLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCISMRQSGC
LPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLL
EQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNE
LGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCM
RALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKEST
LKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNV
SSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWD
MGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQK
ALEAELDAQHLSETFDNIDNLSPKASHRSKQRHKQSLYGDYVFDTNRHDDNRSDNFNT
GNMTVLSPYLNTTVLPSSSSSRGSLDSSRSEKDRSLERERGIGLGNYHPATENPGTSS
KRGLQISTTAAQIAKVMEEVSAIHTSQEDRSSGSTTELHCVTDERNALRRSSAAHTHS
NTYNFTKSENSNRTCSMPYAKLEYKRSSNDSLNSVSSSDGYGKRGQMKPSIESYSEDD
ESKFCSYGQYPADLAHKIHSANHMDDNDGELDTPINYSLKYSDEQLNSGRQSPSQNER
WARPKHIIEDEIKQSEQRQSRNQSTTYPVYTESTDDKHLKFQPHFGQQECVSPYRSRG
ANGSETNRVGSNHGINQNVSQSLCQEDDYEDDKPTNYSERYSEEEQH"
BASE COUNT 1126 a 722 c 868 g 887 t
ORIGIN
1 tcaagatggc ggagggcaag tagcaagggg gcggggtgtg gccgccggaa gcctagccgc
61 tgctcggggg ggacctgcgg gctcaggccc gggagctgcg gaccgaggtt ggctcgatgc
121 tgttcccagg tactgttgtt ggctgttggt gaggaaggtg aagcactcag ttgccttctc
181 gggcctcggc gccccctatg tacgcctccc tgggctcggg tccggtcgcc cctttgcccg
241 cttctgtacc accctcagtt ctcgggtcct ggagcaccgg cggcagcagg agctgcgtcc
301 ggcaggagac gaagagcccg ggcggcgctc gtacttctgg ccactgggcg agcgtctggc
361 aggaagtact taaacaacta caaggaagta ttgaagatga agctatggct tcttctggac
421 agattgattt attagagcgt cttaaagagc ttaacttaga tagcagtaat ttccctggag
481 taaaactgcg gtcaaaaatg tccctccgtt cttatggaag ccgggaagga tctgtatcaa
541 gccgttctgg agagtgcagt cctgttccta tgggttcatt tccaagaaga gggtttgtaa
601 atggaagcag agaaagtact ggatatttag aagaacttga gaaagagagg tcattgcttc
661 ttgctgatct tgacaaagaa gaaaaggaaa aagactggta ttacgctcaa cttcagaatc
721 tcactaaaag aatagatagt cttcctttaa ctgaaaattt ttccttacaa acagatatga
781 ccagaaggca attggaatat gaagcaaggc aaatcagagt tgcgatggaa gaacaactag
841 gtacctgcca ggatatggaa aaacgagcac agaggtcatc tcagaacaag catgaaaccg
901 gctcacatga tgctgagcgg cagaatgaag gtcaaggagt gggagaaatc aacatggcaa
961 cttctggtaa tggtcagggt tcaactacac gaatggacca tgaaacagcc agtgttttga
1021 gttctagtag cacacactct gcacctcgaa ggctgacaag tcatctggga accaaggtgg
1081 aaatggtgta ttcattgttg tcaatgcttg gtactcatga taaggatgat atgtcgcgaa
1141 ctttgctagc tatgtctagc tcccaagaca gctgtatatc catgcgacag tctggatgtc
1201 ttcctctcct catccagctt ttacatggca atgacaaaga ctctgtattg ttgggaaatt
1261 cccggggcag taaagaggct cgggccaggg ccagtgcagc actccacaac atcattcact
1321 cacagcctga tgacaagaga ggcaggcgtg aaatccgagt ccttcatctt ttggaacaga
1381 tacgcgctta ctgtgaaacc tgttgggagt ggcaggaagc tcatgaacca ggcatggacc
1441 aggacaaaaa tccaatgcca gctcctgttg aacatcagat ctgtcctgct gtgtgtgttc
1501 taatgaaact ttcatttgat gaagagcata gacatgcaat gaatgaacta gggggactac
1561 aggccattgc agaattattg caagtggact gtgaaatgta cgggcttact aatgaccact
1621 acagtattac actaagacga tatgctggaa tggctttgac aaacttgact tttggagatg
1681 tagccaacaa ggctacgcta tgctctatga aaggctgcat gagagcactt gtggcccaac
1741 taaaatctga aagtgaagac ttacagcagg ttattgcaag tgttttgagg aatttgtctt
1801 ggcgagcaga tgtaaatagt aaaaagacgt tgcgagaagt tggaagtgtg aaagcattga
1861 tggaatgtgc tttagaagtt aaaaaggaat caaccctcaa aagcgtattg agtgccttat
1921 ggaatttgtc agcacattgc actgagaata aagctgatat atgtgctgta gatggtgcac
1981 ttgcattttt ggttggcact cttacttacc ggagccagac aaacacttta gccattattg
2041 aaagtggagg tgggatatta cggaatgtgt ccagcttgat agctacaaat gaggaccaca
2101 ggcaaatcct aagagagaac aactgtctac aaactttatt acaacactta aaatctcata
2161 gtttgacaat agtcagtaat gcatgtggaa ctttgtggaa tctctcagca agaaatccta
2221 aagaccagga agcattatgg gacatggggg cagttagcat gctcaagaac ctcattcatt
2281 caaagcacaa aatgattgct atgggaagtg ctgcagcttt aaggaatctc atggcaaata
2341 ggcctgcgaa gtacaaggat gccaatatta tgtctcctgg ctcaagcttg ccatctcttc
2401 atgttaggaa acaaaaagcc ctagaagcag aattagatgc tcagcactta tcagaaactt
2461 ttgacaatat agacaattta agtcccaagg catctcatcg tagtaagcag agacacaagc
2521 aaagtctcta tggtgattat gtttttgaca ccaatcgaca tgatgataat aggtcagaca
2581 attttaatac tggcaacatg actgtccttt caccatattt gaatactaca gtgttaccca
2641 gctcctcttc atcaagagga agcttagata gttctcgttc tgaaaaagat agaagtttgg
2701 agagagaacg cggaattggt ctaggcaact accatccagc aacagaaaat ccaggaactt
2761 cttcaaagcg aggtttgcag atctccacca ctgcagccca gattgccaaa gtcatggaag
2821 aagtgtcagc cattcatacc tctcaggaag acagaagttc tgggtctacc actgaattac
2881 attgtgtgac agatgagaga aatgcactta gaagaagctc tgctgcccat acacattcaa
2941 acacttacaa tttcactaag tcggaaaatt caaataggac atgttctatg ccttatgcca
3001 aattagaata caagagatct tcaaatgata gtttaaatag tgtcagtagt agtgatggtt
3061 atggtaaaag aggtcaaatg aaaccctcga ttgaatccta ttctgaagat gatgaaagta
3121 agttttgcag ttatggtcaa tacccagccg acctagccca taaaatacat agtgcaaatc
3181 atatggatga taatgatgga gaactagata caccaataaa ttatagtctt aaatattcag
3241 atgagcagtt gaactctgga aggcaaagtc cttcacagaa tgaaagatgg gcaagaccca
3301 aacacataat agaagatgaa ataaaacaaa gtgagcaaag acaatcaagg aatcaaagta
3361 caacttatcc tgtttatact gagagcactg atgataaaca cctcaagttc caaccacatt
3421 ttggacagca ggaatgtgtt tctccataca ggtcacgggg agccaatggt tcagaaacaa
3481 atcgagtggg ttctaatcat ggaattaatc aaaatgtaag ccagtctttg tgtcaagaag
3541 atgactatga agatgataag cctaccaatt atagtgaacg ttactctgaa gaagaacagc
3601 atg
//