LOCUS AK294539 1793 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53979 complete cds, highly similar to DnaJ
homolog subfamily C member 11.
ACCESSION AK294539
VERSION AK294539.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1793)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1793
/clone="BRAMY3018215"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489163"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 200..1609
/codon_start=1
/note="highly similar to DnaJ homolog subfamily C member
11"
/protein_id="BAG57746.1"
/transl_table=1
/translation="MKVVERRRTPAEIREEFERLQREREERRLQQRTNPKGTISVGVD
ATDLFDRYDEEYEDVSGSSFPQIEINKMHISQSIEAPLTATDTAILSGSLSTQNGNGG
GSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCFVTTNCALQFSSRGI
RPGLTTVLARNLDKNTVGYLQWRWGIQSAMNTSIVRDTKTSHFTVALQLGIPHSFALI
SYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAERKISRHSVLGAAVSVGVPQGVSLKVK
LNRASQTYFFPIHLTDQLLPSAMFYATVGPLVVYFAMHRLIIKPYLRAQKEKELEKQR
ESAATDVLQKKQEAESAVRLMQESVRRIIEAEESRMGLIIVNAWYGKFVNDKSRKSEK
VKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKNLKVLYQFRGVLHQVMV
LDSEALRIPKQSHRIDTDG"
BASE COUNT 479 a 426 c 500 g 388 t
ORIGIN
1 aagatggcga cggccttgag cgaggaggag ctggacaatg aagactatta ctcgttgctg
61 aacgtgcgca gggaggcctc ttctgaagag ctgaaagctg cctaccggag gctctgtatg
121 ctctaccatc cagacaagca cagagaccca gagctcaagt cacaggcgga acgactgttt
181 aaccttgttc accaggctta tgaaggttgt ggaaaggagg agaacccctg ctgaaattcg
241 agaggagttt gagcggctgc agagagagag agaagagagg agattgcagc agcgaaccaa
301 tcccaaggga acgatcagcg ttggagtaga tgccaccgac ctttttgatc gctatgatga
361 ggagtatgaa gatgtgtccg gcagtagctt tccgcagatt gaaattaata aaatgcacat
421 atcccagtcc attgaggcac ccttgacagc gacagacaca gccatcctct ctggaagcct
481 ctcaacccag aatggaaatg gaggaggttc cattaacttt gcgctcagac gagtaacttc
541 ggcaaaggga tggggagagt tggaatttgg agctggagac ctacaggggc ctttgttcgg
601 tctcaagctg ttccgtaatc tcacaccaag atgctttgtg acaacaaact gtgctctgca
661 gttttcatcc cgtggaatcc gacccggcct gaccactgtc ctagctcgga acctagacaa
721 gaacaccgtg ggctacctgc agtggcgatg gggtatccag tcagccatga acactagcat
781 cgtccgagac actaaaacca gccacttcac tgtggccctg cagctgggaa tccctcactc
841 ctttgcactg atcagctatc agcacaaatt ccaagatgac gatcagactc gtgtgaaagg
901 atccctcaaa gcaggcttct ttgggacggt ggtggagtac ggagctgaga ggaagatctc
961 caggcacagc gttttgggtg cagctgtcag cgttggagtt ccacagggcg tttctctcaa
1021 agtcaagctc aacagggcca gtcagacata cttcttccct attcacttga cggaccagct
1081 tctgcccagc gccatgttct atgccaccgt ggggcctcta gtggtctact ttgccatgca
1141 ccgtctgatc atcaaaccat acctcagggc tcagaaagag aaggaattgg agaagcagag
1201 ggaaagcgcc gccaccgatg tgctgcagaa gaagcaagag gcggagtccg ctgtccggct
1261 gatgcaggaa tctgtccgaa ggataattga ggcagaagag tccagaatgg gcctcatcat
1321 cgtcaatgcc tggtacggga agtttgtcaa tgacaagagc aggaagagcg agaaggtgaa
1381 ggtgattgac gtgactgtgc ccctgcagtg cctggtgaag gactcgaagc tcatcctcac
1441 ggaggcctcc aaggctgggc tgcctggctt ttatgacccg tgtgtggggg aagagaagaa
1501 cctgaaagtg ctctatcagt tccggggcgt cctgcatcag gtgatggtgc tggacagtga
1561 ggccctccgg ataccaaagc agtcccacag gatcgataca gatggataaa ctgccaagaa
1621 ccagattttt aaaaggccgc aaaaaatctt ttcctgggag tctacaaatt tggaaatgaa
1681 aaaacccaga catcagatgt ttttatttta tattattatt atagaaggtg gtaccattat
1741 caattatgtg aagggacatg cagacacccc agcttttgag ggtgctgggg gta
//