LOCUS AK294538 2552 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58097 complete cds, moderately similar to
Homo sapiens Rho GTPase activating protein 17 (ARHGAP17),
transcript variant 1, mRNA.
ACCESSION AK294538
VERSION AK294538.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2552)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2552
/clone="BRAMY3018170"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489162"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 73..2511
/codon_start=1
/note="moderately similar to Homo sapiens Rho GTPase
activating protein 17 (ARHGAP17), transcript variant 1,
mRNA"
/protein_id="BAG57745.1"
/transl_table=1
/translation="MKKQFNRMRQLANQTVGRAEKTEVLSEDLLQVEKRLELVKQVSH
STHKKLTACLQGQQGAEADKRSKKLPLTTLAQCLMEGSAILGDDTLLGKMLKLCGETE
DKLAQELIHFELQVERDVIEPLFLLAEVEIPNIQKQRKHLAKLVLDMDSSRTRWQQTS
KSSGLSSSLQPAGAKADALREEMEEAANRVEICRDQLSADMYSFVAKEIDYANYFQTL
IEVQAEYHRKSLTLLQAVLPQIKAQQEAWVEKPSFGKPLEEHLTISGREIAFPIEACV
TMLLECGMQEEGLFRVAPSASKLKKLKAALDCCVVDVQEYSADPHAIAGALKSYLREL
PEPLMTFELYDEWIQASNVQEQDKKLQALWNACEKLPKANHNNIRYLIKFLSKLSEYQ
DVNKMTPSNMAIVLGPNLLWPQAEGNITEMMTTVSLQIVGIIEPIIQHADWFFPGEIE
FNITGNYGSPVHVNHNANYSSMPSPDMDPADRRQPEQARRPLSVATDNMMLEFYKKDG
MGVRVMDTNWVARRGSSAGRKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPA
LSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGASP
SPSQPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQPSPVSLSPTPPSTPS
PYGLSYPQGYSLASGQLSPAAAPPLASPSVFTSTLSKSRPTPKPRQRPTLPPPQPPTV
NLSASSPQSTEAPMLDGMSPGESMSTDLVHFDIPSIHIELGSTLRLSPLEHMRRHSVT
DKRDSEEESESTAL"
BASE COUNT 607 a 772 c 688 g 485 t
ORIGIN
1 gtaaccctgc ggcgggctcc gggctgctcc gtccttcccc agctcccggg ctagcgcggc
61 agcggggcca cgatgaagaa gcagttcaat cgcatgcgcc agctggccaa ccagacggtg
121 ggcagggctg aaaagacaga agttttgagt gaagaccttc ttcaggtgga gaagcgtctg
181 gagctggtga aacaggtgtc ccacagcacg cacaagaagc tcaccgcatg tctgcagggc
241 cagcaagggg cagaggctga caagcgctcc aaaaagttgc ctttgacaac actggctcag
301 tgtctgatgg aggggtcagc tatcctggga gatgacacac ttcttgggaa gatgctgaaa
361 ctctgtggag agacggagga caagctggct caggagctga tacattttga gttgcaagta
421 gagagagacg tgattgagcc cctgtttttg ctggcggagg tggaaatccc aaatattcaa
481 aagcagagga aacacttagc caagttggtg ctggacatgg attcctcacg aaccaggtgg
541 cagcagactt ccaagtcttc aggtttgtcc agcagcttac agcctgcggg tgccaaggct
601 gatgccctca gggaagaaat ggaagaggct gccaacagag tggagatttg cagggaccag
661 ctctcagctg atatgtacag ttttgtggcc aaagaaattg actatgcaaa ctactttcaa
721 acgctaatag aagtgcaagc tgaataccac aggaagtccc tgacactatt gcaggctgta
781 ttgcctcaga tcaaagcaca acaggaggcc tgggtagaga agccttcctt cgggaagccg
841 ctggaggagc acctcaccat cagcggccgg gagatcgcct tccccatcga ggcgtgtgtg
901 accatgctgc ttgagtgtgg gatgcaggag gagggactct tccgagtagc cccctctgcc
961 tccaaactga agaagctgaa agcggccctg gactgctgcg tggtggatgt gcaggagtac
1021 tcggcagacc cccacgcaat tgcaggagct ttgaaatctt acctccgaga gttgccagaa
1081 cctcttatga cctttgaact ctatgatgag tggatccagg cttccaatgt ccaggagcaa
1141 gacaagaagc ttcaggctct atggaatgct tgtgaaaagt tgcccaaggc caatcacaac
1201 aacatccgat acttgataaa atttttatcc aagctgtcag aatatcaaga tgtaaacaag
1261 atgactccca gtaatatggc aattgtttta ggacccaacc tcctatggcc acaagcagaa
1321 gggaacatta cagagatgat gaccacagtg tcgctgcaaa ttgttgggat cattgaacct
1381 atcatccagc atgcagactg gttcttccct ggggagatag agttcaacat tactggcaat
1441 tatgggagtc cagtacacgt gaaccataat gccaactaca gctcaatgcc ctccccagac
1501 atggaccctg ctgaccggcg ccagcccgag caggcccgcc ggcccctcag cgtcgccacg
1561 gataatatga tgctggagtt ttacaaaaag gatggcatgg gtgtgagggt catggacaca
1621 aactgggtgg ctcgaagagg ctcctcggcc ggtcggaaag tgtcctgcgc cccgccctcc
1681 atgcagcctc ccgccccgcc cgccgagctg gctgcgcccc tgccttcgcc gctgccggag
1741 cagcccctgg acagccccgc ggcccccgcg ctctctccat ccggcctggg cctccagcct
1801 gggcccgagc gcaccagcac aacaaaaagc aaggaacttt ctccaggctc tgcacagaaa
1861 ggaagtccag gctccagcca gggcacagcc tgtgcaggga ctcaaccagg ggctcaacct
1921 ggagctcagc cgggcgccag ccccagcccc agccagccgc ctgcagacca gagtcctcac
1981 accctccgga aagtttcaaa gaagctggca ccgattccac ccaaggtccc ctttggccag
2041 ccgggggcta tggcagacca gtccgctggc cagccgtccc cagtcagcct gtcccccacc
2101 ccgcccagca ccccgtcacc ctatggactg agctaccctc aggggtactc cttggcctcg
2161 ggccagctct ccccagctgc agctcctccc ctggcctctc cttctgtctt tacaagcact
2221 ttgagcaaat cacggcccac tcctaagccg cgacagagac ctactctgcc gcctcctcag
2281 cctcccacag taaacctctc ggcctctagt ccacagtcca cggaggcccc catgctagat
2341 ggcatgtccc ctggggaaag catgtctaca gatcttgtcc actttgatat tccctcgatc
2401 cacatagagc tcgggtcgac gctccgcctg agtcccctgg agcacatgcg gcgacactca
2461 gtaactgaca agagggactc ggaggaggag tctgagagca ccgccctctg acatgacacc
2521 gcccatcctg cctcgcgtgt acatacatca cg
//