LOCUS AK294536 1277 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51830 complete cds, highly similar to Ligatin.
ACCESSION AK294536
VERSION AK294536.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1277)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1277
/clone="BRAMY3018137"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489160"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 124..543
/codon_start=1
/note="highly similar to Ligatin"
/protein_id="BAG57743.1"
/transl_table=1
/translation="MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPG
KEELNIVKLYAHKGDAVTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLV
LEKLVGGADLMLPGLVMPPAGLPQSPCSHWSCSHVHS"
BASE COUNT 290 a 301 c 297 g 389 t
ORIGIN
1 ttttttcgcg gccgggcccc agcatggctg cccccacggc tgagggcctg gcagctgctg
61 cgccctcgct ttcttgacat tccctggctt ctgtgctctc ttccccaggc caccccagca
121 gacatgtttg ccaaggcctt tcgggtcaag tccaacacgg ccatcaaggg gtcggacagg
181 agaaagcttc gagctgatgt gacaactgct ttccccaccc ttggaactga tcaagtctct
241 gagttagtac ctggaaagga ggagctcaac attgtgaagt tgtatgctca caaaggggat
301 gcagtgactg tgtacgtgag tggtggtaac cccatcctct ttgaactgga gaaaaatctg
361 tatccaacag tgtacacgct gtggtcctat cctgatcttc tgccaacctt tacaacatgg
421 cctctggtgc tcgagaaact ggtaggggga gcagatttga tgctgcctgg actggtgatg
481 ccccctgctg gtctgcctca gagcccctgt agccattgga gttgcagcca tgtccacagc
541 tgagatgctc acgtcaggcc tgaagggaag gggcttctct gtgctccaca cttaccagga
601 ccacttgtgg tgggtacaga gtttcttctg ttttacagag aaccggggca gctggggaga
661 ggatggggcc tgtgattcag gagtgagagt tttggtccta gccatgtctt taagcaagtt
721 gctaagccca gacttttatt tccttacaaa tataaagaaa atattttttt cccctgtttg
781 gacaagtaat gagagagaac tttattttct aagtgaatta tagaatctta gacccaaagg
841 aagaccttag ggatcatctg ctctgcctct cagtacagtg atactcgttt ttttatagcc
901 ctggtcaatc tggccctagc tgcgatgcac attttagaca tcatgtgacc ccatgatgag
961 tgcttctgaa tcctaatcac tgcagggtag acctttagac tccaggatta taacctgatt
1021 acttttatgt tattcagatt tcacattcca gactcctcct cctcatgaaa gtaacgcatt
1081 ctgactgtaa aggttgcatt cttgagacgt gtacctgttc attttctggt tattttcttg
1141 tcattttagc aaaacagtaa gcagtgattt tctcaaagca cacatttagc caagtattgt
1201 ggcctgttgg tatagattca ttcttatatt ttccagccca gtcttggaat tattaatttt
1261 tttttttttt ttttttt
//