LOCUS AK294535 2810 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59319 complete cds, highly similar to PDZ
domain-containing RING finger protein 4.
ACCESSION AK294535
VERSION AK294535.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2810)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2810
/clone="BRAMY3017971"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489159"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 69..2582
/codon_start=1
/note="highly similar to PDZ domain-containing RING
finger protein 4"
/protein_id="BAG57742.1"
/transl_table=1
/translation="MAHVRNFVGDLGGGHRRDGEHKPFTIVLERENDTLGFNIIGGRP
NQNNQEGTSTEGIYVSKILENGRADRADGLEIHDKIMEVNGKDLSKATHEEAVEAFRN
AKEPIVVQVLRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDI
CPFLLSDSCHSLHPMEHEFYEDNEYISSLPADADRTEDFEYEEVELCRVSSQEKLGLT
VCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSNDE
CKRIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQPTANEVEQPKKQE
EEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSKRDLGQS
QDTLGSVELQYNESLVSGEYIDSDCIGNPDEDCERFRQLLELKCKIRNHGEYDLYYSS
STIECNQGEQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWTLHDGGF
RNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVIN
LTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSAESKEKVLEGSKLPDQEKAV
SEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQK
CSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGR
YWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMK
KRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV"
BASE COUNT 882 a 590 c 739 g 599 t
ORIGIN
1 agctctgggc gctgcagggc gaggtgcagc tcacggcgcg caggtaccag gagaagttca
61 cccaatacat ggctcacgtc cgcaacttcg tcggcgacct cggtggcggc caccgcaggg
121 atggagagca taagccattc actattgtgt tagaaagaga aaatgacact ttgggattca
181 atattatagg aggtcgacca aatcagaata atcaggaagg aacatcgact gaaggaattt
241 acgtttcaaa aattttagaa aatggacgtg ctgacagagc agatggcctg gagatccatg
301 acaaaatcat ggaggtcaat gggaaggatc tttcaaaggc cactcatgaa gaggcagtgg
361 aagcttttcg caatgccaag gagcccattg tggtgcaggt gttaaggcga acacctctta
421 gtagaccagc ctatgggatg gcttcagaag tgcagcttat gaatgccagc actcagacag
481 acatcacctt cgaacacatc atggctctgg ccaagcttcg tccacctacc cctccagtgc
541 cagacatctg tccattcctg ctctcagaca gctgccattc tctacatcca atggagcatg
601 aattttatga ggacaatgag tatatttcca gcttgcctgc tgatgcagac agaacagaag
661 actttgaata tgaggaggtc gagttgtgtc gtgttagcag tcaagagaag ctgggcctga
721 cagtctgtta ccgaacagat gatgaagaag acaccggcat ttatgtcagc gaggttgacc
781 caaatagcat tgctgccaaa gacggccgga ttcgagaagg ggatcggatt ttgcaaataa
841 atggggaaga tgtccagaat cgagaagaag cagtggcctt gctgtctaac gatgagtgta
901 agagaatcgt gctgcttgtt gcaaggccag agattcagct ggatgaaggc tggctggaag
961 atgaaaggaa tgaattctta gaggagttaa acttggagat gttggaagaa gagcataatg
1021 aagcaatgca gcccactgcc aatgaggtgg agcagccaaa aaagcaagaa gaagaagaag
1081 gcacaacaga cactgcaaca tcctcatcca acaaccatga gaaggacagt ggagtaggac
1141 gtacagatga aagcttgcga aatgatgaga gctcagagca ggagaatgca gccgaggacc
1201 ccaatagcac atctttgaag agcaagagag acctggggca gagccaagac actctgggaa
1261 gtgttgaact tcagtacaat gagagcctcg tatctggtga atacattgac tcagactgca
1321 ttggcaaccc agatgaggac tgtgaaagat tcaggcagct cttggagctc aaatgcaaga
1381 ttcgaaatca tggagagtat gacctgtatt actcaagcag cacaattgaa tgcaatcaag
1441 gggagcaaga gggagtggag catgagctac agttgcttaa tgaagaactg agaaacattg
1501 agcttgagtg tcagaatatc atgcaggctc acaggctcca gaaagtgaca gaccagtatg
1561 gagacatctg gacattgcat gatggaggat tccggaatta taacaccagc atagatatgc
1621 aaaggggaaa gctagatgac atcatggagc atccagaaaa gtctgacaag gacagttcta
1681 gtgcttacaa cacagctgag agctgcagaa gtactccgct cactgtagac cgttcccctg
1741 acagttccct tccaagggtg atcaacctca ccaataagaa aaacctgaga agcacaatgg
1801 cagccaccca gtcctcttcc ggacagagca gtaaagagtc gacctccacc aaagccaaaa
1861 ccactgagca aggttgtagc gctgaaagca aggagaaggt tttagaaggc agcaagcttc
1921 ctgatcaaga gaaggcagtc agcgaacaca tcccttacct ctctccttac cacagctcct
1981 catatagata tgcaaacatc ccagcacacg cccggcatta tcaaagctac atgcagttaa
2041 ttcaacagaa atctgcagtc gagtatgctc agagtcagct cagcttggtg agcatgtgca
2101 aggagtctca gaagtgttca gagcccaaga tggaatggaa ggtgaaaatt aggagcgacg
2161 ggacacggta catcacaaag agacccgtgc gagaccgaat cctgaaggaa cgtgccttaa
2221 agatcaagga agagcggagt ggcatgacca cagacgatga caccatgagc gagatgaaaa
2281 tggggcgcta ctggagcaaa gaggagagaa agcagcacct ggttagggcc aaagagcagc
2341 gccgtcgccg tgagttcatg atgcgaagca ggttagagtg tctcaaggag agccctcaga
2401 gcggcagtga gggcaagaag gagatcaata tcattgaact gagtcacaaa aagatgatga
2461 aaaagagaaa caagaaaatt ttggacaact ggatgacaat ccaagaactg atgacccatg
2521 gggccaagtc tccagatggc acgagagtcc ataatgcctt cttgtcggtg accactgtat
2581 gaccgaatga atggaatgca tgcgactgat tttaggagga tgctaccagt ttcggtagag
2641 tatgattgcc tcgttcaatg tggcgttttt atatatattt tgtgactctt tatagtttaa
2701 attttttgta agcaaaaaat acctggtaat ttttcatttg tttttcatat actggtacct
2761 tctttttggc tgagatcttt cttttacttg tgatatattc acattactcg
//