LOCUS AK294532 2459 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ54713 complete cds, highly similar to Gephyrin. ACCESSION AK294532 VERSION AK294532.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2459) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2459 /clone="BRAMY3017927" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000489156" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 25..2373 /codon_start=1 /note="highly similar to Gephyrin" /protein_id="BAH11801.1" /transl_table=1 /translation="MATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGINLKDLLQ DPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEKFPT FPFCGLQKGATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGS KKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQT EDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASL STTPSESPRAQATSRLSTASCPTPKQIRRPDESKGVASRVGSLKARLPSCSSTYSVSE VQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIIN YRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVM PGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGH DIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPG KIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGE KDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCN LFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGN QMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL" BASE COUNT 705 a 577 c 590 g 587 t ORIGIN 1 agtgcggtga ctgcgctggg aaacatggcg accgagggaa tgatccttac taaccacgac 61 catcaaatcc gtgtcggagt ccttacagtg agtgatagtt gcttcaggaa tcttgcagaa 121 gaccgcagtg ggataaatct caaagatctc ttacaagatc cttctttgtt gggtgggact 181 atatcagcat acaagatagt accagatgaa atagaagaaa tcaaggaaac cctgatagat 241 tggtgtgatg aaaaggaact taatttgata ttaacaactg gaggaacagg atttgcacca 301 cgagatgtca ctccagagaa attcccaaca ttcccatttt gtgggctcca gaaaggggcc 361 acaaaagaag taatagaacg ggaagcacca gggatggccc tggcaatgct gatgggatca 421 cttaatgtta cacctctggg catgctctct aggcctgtat gtggaatcag agggaaaacg 481 ctcataatta acctgccagg tagcaagaaa ggatctcagg aatgctttca attcatactg 541 ccagctctac ctcatgccat tgacctttta cgtgatgcca ttgtaaaagt aaaggaggtg 601 catgatgaac ttgaagattt gccttcccca cctccccctc tttcccctcc tcctactacc 661 agcccccata aacagacaga agacaaagga gttcaatgtg aggaagagga agaagagaag 721 aaagacagtg gtgttgcttc aacagaagat agttcctcat cacatataac tgcagcagcc 781 attgctgcca agattccaga ctccatcatt tctcgtggtg ttcaggtgct cccacgagac 841 acagcctccc tcagcactac tccctcagaa tcgcctcgtg ctcaggctac atctcgcctc 901 tctacagctt cctgcccaac accaaaacaa attagacggc cggatgaaag caaaggagtt 961 gctagtagag ttggatccct caaagctcgg cttccctcgt gctcatctac ctatagtgta 1021 tctgaggtcc agtccaggtg cagcagcaag gagaacattc tcagagccag tcacagtgct 1081 gtcgatatca ccaaggtggc tagaagacat cgcatgtctc cttttcctct gacatctatg 1141 gacaaagcct ttatcacagt cctggagatg actccggtgc ttgggacaga aatcatcaat 1201 taccgagatg gaatggggcg agtccttgct caagatgtat atgcaaaaga caatttaccc 1261 cccttcccag catcagtaaa agatggctat gctgtccgag ctgctgatgg cccaggagat 1321 cgtttcatca ttggggaatc ccaagctggt gaacagccaa ctcagacagt aatgccagga 1381 caagtcatgc gggttacaac aggtgctcca ataccctgcg gtgctgatgc agtagtacaa 1441 gtggaagata ccgaacttat cagggaatca gatgatggca ctgaagaact tgaagtgcga 1501 attctggtgc aagctcggcc aggccaagat atcagaccca tcggccatga cattaaaaga 1561 ggggaatgtg ttttggccaa aggaacccac atgggcccct cagagattgg tcttctggca 1621 actgtaggtg tcacagaggt tgaagttaat aagtttccag tggttgcagt catgtcaaca 1681 gggaatgagc tgctaaatcc tgaagatgac ctcttaccag ggaagattcg agacagcaat 1741 cgttcaactc ttctagcaac aattcaggaa catggttacc ccacgatcaa cttgggtatt 1801 gtaggagaca acccagatga cttactcaat gccttgaatg agggtatcag tcgtgctgat 1861 gtcatcatca catcaggggg tgtatccatg ggggaaaagg actatctcaa gcaggtgctg 1921 gacattgatc ttcatgctca gatccatttt ggcagggttt ttatgaaacc aggcttgcca 1981 acaacatttg caactttgga tattgatggt gtaagaaaaa taatctttgc actacctggg 2041 aatcctgtat cggctgtggt cacctgcaat ctctttgttg tgcctgcact gaggaaaatg 2101 cagggcatct tggatcctcg gccaaccatc atcaaagcaa ggttatcatg tgatgtaaaa 2161 cttgatcctc gtccagaata ccatcggtgt atactaactt ggcatcacca agaaccacta 2221 ccttgggcac agagtacagg taatcaaatg agcagccgtc tgatgagcat gcgcagtgcc 2281 aatggattgt tgatgctacc tccaaagaca gaacagtacg tggagctcca caaaggcgag 2341 gtggtggatg tcatggtcat tggacggcta tgatggtcac cagcaggaga aagctttgat 2401 gcatgtccac atatcattga ctgtatcctg taatatgcaa cggcacagct agttttccc //