LOCUS AK294519 6039 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61234 complete cds, highly similar to
Trinucleotide repeat-containing 6B protein.
ACCESSION AK294519
VERSION AK294519.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6039)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..6039
/clone="BRAMY3015945"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489143"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 203..5704
/codon_start=1
/note="highly similar to Trinucleotide repeat-containing
6B protein"
/protein_id="BAG57731.1"
/transl_table=1
/translation="MREKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTK
PSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHK
VLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNAQVTGALLQSESGTAPDSTLGGAA
ASNYANSTWGSGASSNNGTSPNPIHIWDKVIVDGSDMEEWPCIASKDTESSSENTTDN
NSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKAKSVQSSNSTTE
NNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGTSRKGALETDNSNSSA
QVSTVGQTSREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENK
GMPFGMGLGNTSRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTVSGQSNSGNNGNNG
KEREDSWKGASVQKSTGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTSGVSQ
GEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSTG
SEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWG
QTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGE
LSASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTPSSWNENPSKDQGWGGGRQPNQ
GWSSGKNGWGEEVDQTKNSNWESSASKPVSGWGEGGQNEIGTWGNGGNASLASKGGWE
DCKRSPAWNETGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPPPPPPGNVRPSNS
SWSSGPQPATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNS
QGGPAPREPNLPTPMTSKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGAST
TGWGNTPANAPNAMKPNSKSMQDGWGESDGPVTGARHPSWEEEEDGGVWNTTGSQGSA
SSHNSASWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVG
SLSDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQD
GCLGDEAPCSPFSPSPSYKLSPSGSTLPNVSLGAIGTGLNPQNFAARQGGSHGLFGNS
TAQSRGLHTPVQPLNSSPSLRAQVPPQFISPQVSASMLKQFPNSGLSPGLFNVGPQLS
PQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSAL
QQQQQQQQRQPGMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSG
GMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQ
FDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDP
ESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSF
TNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKP
SSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTIC
MQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRF
LAQAQPPTPAATPSAPAAGWQSLETGQNQSDPVGPALNLFGGSTGLGQWSSSAGGSSG
ADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI"
BASE COUNT 1728 a 1549 c 1553 g 1209 t
ORIGIN
1 gagggagaga gagagcaaga gggagagtgt gtgagagaga gttagttcaa gccaaaatgg
61 ccgacagagt ctctgctggt ttctgaatat ttaaaataca aaaaaacaga tagacaaaaa
121 gaattcattt tttggacctt ttttcatttc catttctacc ttgtatgcct caatttgctg
181 gatttaagca ctgctgcact ttatgagaga gaaggagcaa gaaagggaag aacagttaat
241 ggaagacaag aaaaggaaga aagaggataa aaagaaaaaa gaagccactc agaaggtcac
301 ggaacaaaaa accaaagtgc ccgaagtgac gaaaccaagt ttaagccaac caacggccgc
361 cagcccaatt ggcagctctc catcgccacc agtcaatggt ggcaacaatg ccaaaagggt
421 ggcagtgccg aacggacaac cgccaagcgc cgcccgctac atgcctcggg aggtgccgcc
481 gcgattccgt tgccagcagg accacaaagt gttactaaaa cgtgggcagc cccctccacc
541 gtcctgcatg ctccttgggg gtggggcagg gcctcctccc tgcacagcac ctggagcaaa
601 cccaaacaac gcacaagtga caggagcgct gctgcagagt gagagtggga ctgcgccaga
661 ctcaaccctt ggaggtgctg ctgcttcaaa ttatgcaaat tccacttggg gctcgggagc
721 ctcctccaac aacggcacct cccccaaccc aattcacatc tgggacaagg tgattgtaga
781 cgggtctgac atggaagagt ggccttgtat tgccagcaaa gacactgaat cttcttccga
841 aaacaccacc gataacaaca gtgcctcgaa ccctggctct gagaagagca ctctgccagg
901 aagcaccact agtaacaaag gaaaagggag ccagtgccag tctgcaagtt ctgggaacga
961 atgtaatctt ggggtctgga aatctgaccc taaggctaaa tctgttcaat cttccaactc
1021 tactacagag aacaacaatg gactaggaaa ttggaggaat gtgagtggtc aggatagaat
1081 tggacctggc tctggcttca gcaactttaa cccaaatagc aacccatctg cctggccagc
1141 actggtccaa gaaggaactt ctaggaaagg ggcattggaa acagataata gtaattccag
1201 tgcacaggtt agcacagtag gtcagacatc cagggaacag cagtcaaaga tggaaaatgc
1261 gggtgttaat tttgttgtct ctggcagaga acaggctcaa attcataaca ctgatggacc
1321 aaaaaatgga aacactaact ccttgaactt aagttcacca aaccccatgg agaataaggg
1381 aatgcccttt ggaatgggct tggggaacac ctccaggagc actgatgccc cttcacaaag
1441 cactggagat cgaaagactg ggagtgttgg atcttggggt gcagctaggg ggccttctgg
1501 aactgacaca gtctctggac aaagcaattc tggaaacaat gggaacaatg gaaaagagag
1561 agaggactcc tggaaaggag cttctgttca gaaatcaact gggtcaaaaa atgactcttg
1621 ggacaacaat aacaggtcta cgggtgggtc ctggaacttt ggcccccagg actctaatga
1681 caacaaatgg ggtgaaggga acaaaatgac atctggggtc tctcagggag aatggaaaca
1741 gccgactggg tctgatgagt tgaaaattgg agaatggagt ggtccaaacc aaccaaattc
1801 tagcactgga gcatgggaca atcaaaaggg ccaccccctc cctgaaaacc aaggcaatgc
1861 ccaggctccc tgttggggaa gatcttccag ctccacagga agtgaagttg gaggtcaaag
1921 cactggaagc aaccacaaag caggaagtag tgacagtcat aactctggcc gtcggtcgta
1981 caggcccaca catcctgatt gtcaggctgt cttgcagact cttttgagcc gaactgattt
2041 ggaccccagg gtgctctcaa acactggctg gggccaaact caaattaagc aggacacagt
2101 gtgggacatt gaagaggtgc caaggcctga ggggaaatct gacaaaggaa ctgaggggtg
2161 ggagagcgct gccacacaga ccaagaactc agggggctgg ggagatgcac ccagccaaag
2221 caatcaaatg aagtctggat ggggggagct ctcagcctct acagagtgga aagaccccaa
2281 gaacacagga ggctggaatg actacaagaa caacaactct tccaactggg gaggaggacg
2341 acctgatgaa aagacacctt cctcttggaa tgagaatccc agcaaggatc aggggtgggg
2401 aggtggacgc cagcccaatc aaggatggtc ttctggaaag aatggttggg gggaggaagt
2461 cgatcagaca aaaaacagca attgggaaag ttctgcaagt aaacctgtgt ctgggtgggg
2521 tgaaggaggg cagaatgaaa tcgggacttg gggtaatggt ggcaatgcaa gcctagcttc
2581 aaaaggtggg tgggaggatt gcaaaagatc cccagcatgg aatgagacgg gccgacagcc
2641 caattcctgg aataaacaac accaacagca gcagccccca cagcagccgc cgccaccaca
2701 accagaggct tctggttcgt ggggaggccc acccccacca cctccaggca acgttcgacc
2761 ttccaattcc agctggagca gcgggccaca gcctgcaaca cctaaggatg aggaacccag
2821 tggttgggaa gagccatccc cacagtcaat tagtcggaaa atggacattg atgatggcac
2881 ttcagcatgg ggagacccta acagttataa ctacaagaat gtgaatctgt gggataagaa
2941 ttcccaaggg ggcccagcac ctcgagaacc aaacctgccc accccaatga ccagtaaatc
3001 ggcatcagtc tggagcaaaa gcacaccacc tgctccagat aatggtactt ccgcttgggg
3061 tgagccaaat gaaagcagtc ctgggtgggg cgagatggat gatacaggag catcgaccac
3121 aggctggggg aacacgcccg ccaacgctcc caatgccatg aagcctaatt ccaaatctat
3181 gcaagacggc tggggggaga gtgacgggcc agtcacagga gctcgccatc ccagctggga
3241 agaggaggag gatggaggag tctggaacac cactggctct cagggcagtg cttcctccca
3301 caactcagca agctggggac aaggaggaaa gaaacaaatg aagtgctcac tcaaaggagg
3361 aaacaatgat tcatggatga atcctcttgc caaacagttt tcaaatatgg gattgctgag
3421 tcagactgaa gataatccaa gcagcaaaat ggatttgtct gtaggaagcc tttcagataa
3481 aaaatttgat gtggacaagc gagcgatgaa tctcggggat tttaatgata tcatgaggaa
3541 ggatcgatct gggttccgtc cacctaattc caaagacatg ggaaccacag atagtgggcc
3601 ttattttgag aagctgactt tgcctttctc caatcaagat gggtgccttg gggatgaggc
3661 tccctgctct cccttctccc cttctcccag ctacaagctg tctccctctg gttccacact
3721 acccaacgtc agccttggag caatcggcac agggctcaac ccccaaaact tcgctgctag
3781 acaaggcggt agtcatggtt tgtttggaaa cagcacagca caatcgagag gtctgcacac
3841 acccgtgcag ccactaaatt cttctcccag tctccgggcg caagtgcctc cccagtttat
3901 ttccccccag gtttctgcct caatgctcaa gcagtttccc aacagtggcc tgagtccagg
3961 tcttttcaat gtggggcccc agttatctcc tcaacaaatt gccatgctga gccagcttcc
4021 acaaattccc cagtttcagt tggcatgtca gcttctcttg cagcagcagc aacagcagca
4081 gttgttacag aaccagagaa agatttctca agctgtacgc caacagcaag agcagcagct
4141 ggctcgaatg gtgagtgcac tgcagcagca gcagcagcag cagcagaggc agccaggcat
4201 gaagcactcg ccctctcatc ctgttgggcc caagccgcat ctggacaaca tggtacccaa
4261 cgcattgaat gtggggctcc cagaccttca aaccaaaggg ccaatacctg gatatggttc
4321 tggcttcagc tctggcggca tggactatgg catggttggt gggaaggagg ctggaaccga
4381 gtctcgcttt aaacagtgga cctccatgat ggaggggctg ccctctgtag ccacacagga
4441 agccaatatg cacaaaaatg gcgctatagt ggcccctggt aaaacccggg gagggtcacc
4501 gtacaaccag tttgatatca tccctggtga cacactgggt ggccatacgg gtcctgctgg
4561 tgatagctgg ttacctgcca aatctccacc aacaaataaa atcggaagta aatccagcaa
4621 tgccagttgg cctccagaat tccaaccagg agtgccatgg aaaggtatcc aaaacattga
4681 ccctgaatct gacccctatg tcaccccagg aagtgtgctg gggggtacag ccacatctcc
4741 cattgtagat actgaccacc aactgctgcg ggataacacc acagggtcta attcttccct
4801 caacacctcg ctgccttcac ctggtgcctg gccctacagt gcctctgaca actcctttac
4861 caacgttcat agcacttcag caaagttccc tgattacaaa tcaacatggt ccccagatcc
4921 cataggacac aaccccactc atctctccaa caagatgtgg aaaaaccata tttcctccag
4981 gaacactaca ccgctgcccc gcccacctcc tggtctgacc aaccccaaac catcatctcc
5041 ctggagcagc acagcacccc gatcagtcag ggggtggggg acacaggact cacggctcgc
5101 ctcggcctct acctggagtg atggtggctc agttcgtcct agttactggc tggttcttca
5161 caatctcacc ccacagattg atgggtcaac cttgagaacg atctgcatgc agcatggccc
5221 actgctgaca ttccatctga atctaaccca gggcactgcc ctgatccgat acagcaccaa
5281 acaggaggcg gccaaggccc aaactgcact gcacatgtgt gtgttgggaa acactaccat
5341 ccttgctgag tttgccactg atgatgaagt cagccgcttt ctggcacaag ctcagccccc
5401 tacacctgca gcaaccccaa gtgcgccagc tgcggggtgg cagtcgctgg agaccggcca
5461 gaaccagtca gatcccgtgg gacctgctct gaatcttttt ggtgggtcca ctgggctcgg
5521 gcagtggagc agcagcgctg gtggcagcag cggggccgat cttgctggcg cttcattgtg
5581 ggggccccca aactattctt ctagcttatg gggagtccca acggtggaag atccccatag
5641 gatgggcagc cctgctcctt tactacctgg tgaccttctg ggaggagggt cggattcaat
5701 ctgaacttag aactttcaac tctgacctcg tgaccttttt tggaacagca gcagcactaa
5761 cttgaccttt tcgttttttt tttcaacttg caataaatac atttttaaaa ggaaaaaaga
5821 aaacggagag aaaaaaaggt gggtcattga cagactgtct gagcacatag ttgcctccct
5881 tataacttca gttttttcgt ttggaatatg aatccaaaaa gagaacatat cactcttgaa
5941 atacttgaat catgaacgcc aacctagaaa gacaatgtga agcaagtaca cataccattt
6001 aaatttaaac acaaaaaaaa attaaaaaaa ttagtttct
//