LOCUS AK294511 4075 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ56888 complete cds, highly similar to Protein kinase C-binding protein 1. ACCESSION AK294511 VERSION AK294511.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4075) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4075 /clone="BRAMY3014871" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000489135" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 214..3774 /codon_start=1 /note="highly similar to Protein kinase C-binding protein 1" /protein_id="BAH11794.1" /transl_table=1 /translation="MFSSLQKSFNLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQK RKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLC CELCPRVYHAKCLRLTPEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAK WILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSN PHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKK TKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKID KQEKVKPNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDA EKKATSSHFSASEESMDFLGKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDK TSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIES CKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQ MDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPS PHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQ DVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSP VKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSS QGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLP IATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQW LHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCAN CKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQG SSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRS NKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD" BASE COUNT 1210 a 1079 c 993 g 793 t ORIGIN 1 ataagtattg acattacaca gtgttaacaa tgcatccaca gagtcccaaa tctgccagcc 61 tgttctctct tcctaactgt ggaaaaatga gacggttgct tgaacatttg ttggcagcat 121 tcctgcctga agtattcagc tcctctaggc tgttacaagc caaataatgg ttcccttgaa 181 tgcagccttc ctccatgatc aatacacctt tgaatgtttt catcgctgca gaaatccttc 241 aacttggctg aagaggaaat aaaaacagaa caggaggtgg tagagggcat ggatatctct 301 actcgctcca aagatcctgg ctctgcagag agaacagccc agaaaagaaa gttccccagc 361 cctccacatt cttccaatgg ccactcgccg caggacacat caacaagccc cattaaaaag 421 aaaaagaaac ctggcttact gaacagtaac aataaggagc aggatggacg gaatgatttc 481 tactgctggg tttgtcaccg ggaaggccaa gtcctttgct gtgagctctg tccccgggtt 541 tatcacgcta agtgtctgag actgacaccg gaaccagagg gggactggtt ttgtcctgaa 601 tgtgagaaaa ttacagtagc agaatgcatc gagacccaga gtaaagccat gacaatgctc 661 accattgaac agttatccta cctgctcaag tttgccattc agaaaatgaa acagccaggg 721 acagatgcat tccagaagcc cgttccattg gaacagcacc ctgactatgc ggaatacatc 781 ttccatccaa tggacctttg tacattggaa aagaatgcga aaaagaaaat gtatggctgc 841 acagaagcct tcctggctga tgcaaagtgg attttgcaca actgcatcat ttataatggg 901 ggaaatcaca aattgacgca aatagcgaaa gtagtcatca aaatctgtga acatgagatg 961 aatgaaatcg aagtatgtcc agaatgttat ctagctgctt gccaaaaacg agataactgg 1021 ttttgtgagc cttgtagcaa tccacatcct ttggtctggg ccaaactgaa ggggtttcca 1081 ttctggcctg caaaagctct aagggataaa gacgggcagg tcgatgcccg attctttgga 1141 caacatgaca gggcctgggt tccaataaat aattgctacc tcatgtctaa agaaattcct 1201 ttttctgtga aaaagactaa gagcatcttc aacagtgcca tgcaagagat ggaggtttac 1261 gtggagaaca tccgcaggaa gtttggggtt tttaattact ctccatttag gacaccctac 1321 acacccaaca gccagtatca aatgctgctc gatcccacca accccagcgc cggcactgcc 1381 aagatagaca agcaggagaa ggtcaagccc aactttgaca tgacggcatc ccccaagatc 1441 ctgatgagca agcctgtgct gagtgggggc acaggccgcc ggatttcctt gtcggatatg 1501 ccgcgctccc ccatgagcac aaactcttct gtgcacacgg gctccgacgt ggagcaggat 1561 gctgagaaga aggccacgtc gagccacttc agtgcgagcg aggagtccat ggacttcctg 1621 ggtaagagca cagcttcacc agcctccacc aagacgggac aagcagggag tttatccggc 1681 agcccaaagc ccttctctcc tcaactgtca gctcctatca cgacgaaaac ggacaaaacc 1741 tccaccaccg gcagcatcct gaatcttaac ctggatcgaa gcaaagctga gatggatttg 1801 aaggagctga gcgagtcggt ccagcaacag tccacccctg ttcctctcat ctctcccaag 1861 cgccagattc gtagcaggtt ccagctgaat cttgacaaga ccatagagag ttgcaaagca 1921 caattaggca taaatgaaat ctcggaagat gtctatacgg ccgtagagca cagcgattcg 1981 gaggattctg agaagtcaga tagtagcgat agtgagtata tcagtgatga tgagcagaag 2041 tctaagaacg agccagaaga cacagaggac aaagaaggtt gtcagatgga caaagagcca 2101 tctgctgtta aaaaaaagcc caagcctaca aacccagtgg agattaaaga ggagctgaaa 2161 agcacgtcac cagccagcga gaaggcagac cctggagcag tcaaggacaa ggccagccct 2221 gagcctgaga aggacttttc cgaaaaggca aaaccttcac ctcaccccat aaaggataaa 2281 ctgaagggaa aagatgagac ggattcccca acagtccatt tgggcctgga ctctgattca 2341 gagagcgaac ttgtcataga tttaggagaa gaccattctg ggcgggaggg tcgaaaaaat 2401 aagaaggaac ccaaagaacc atctcccaaa caggatgttg taggtaaaac tccaccatcc 2461 acgacggtgg gcagccattc tcccccggaa acaccggtgc tcacccgctc ttccgcccaa 2521 acttccgcgg ctggcgccac agccaccacc agcacgtcct ccacggtcac cgtcacggcc 2581 ccggcccccg ccgccacagg aagcccagtg aaaaagcaga ggccgctttt accgaaggag 2641 actgccccgg ccgtgcagcg ggtcgtgtgg aactcatcaa gtaagtttca aacgtcctcc 2701 caaaagtggc acatgcagaa gatgcagcgt cagcagcagc agcagcagca gcaaaaccag 2761 cagcagcagc ctcagtcttc ccaggggacg agatatcaga ccagacaggc tgtgaaagct 2821 gtccagcaga aggagatcac acagagccca tccacgtcca ccatcaccct ggtgaccagc 2881 acacagtcat cgcccctggt caccagctcg gggtccatga gcacccttgt gtcctcagtc 2941 aacgctgacc tgcccatcgc cactgcctca gctgatgtcg ccgctgatat tgccaagtac 3001 actagcaaaa tgatggatgc aataaaagga acaatgacag aaatatacaa cgatctttct 3061 aaaaacacta ctggaagcac aatagctgag attcgcaggc tgaggatcga gatagagaag 3121 ctccagtggc tgcaccagca agagctctcc gaaatgaaac acaacttaga gctgaccatg 3181 gcggagatgc ggcagagcct ggagcaggag cgggaccggc tcatcgccga ggtgaagaag 3241 cagctggagt tggagaagca gcaggcggtg gatgagacca agaagaagca gtggtgcgcc 3301 aactgcaaga aggaggccat cttttactgc tgttggaaca ccagctactg tgactacccc 3361 tgccagcaag cccactggcc tgagcacatg aagtcctgca cccagtcagc tactgctcct 3421 cagcaggaag cggatgctga ggtgaacaca gaaacactaa ataagtcctc ccaggggagc 3481 tcctcgagca cacaatcagc accttcagaa acggccagcg cctccaaaga gaaggagacg 3541 tcagctgaga aaagcaagga gagtggctcg acccttgacc tttctggctc cagagagacg 3601 ccctcctcca ttctcttagg ctccaaccaa ggctctgacc attcccggag taataaatcc 3661 agttggagca gcagtgatga gaagagggga tcgacacgtt ccgatcacaa caccagtacc 3721 agcacgaaga gcctcctccc gaaagagtct cggctggaca ccttctggga ctagcagtga 3781 atcgggacac aaaccaccca ccccattggg agaaaaaccc agacgccagg aaaagaagaa 3841 acaacaaagg caggagaaca gccactttca gacttgaaaa tgacaaaacc ctcagttgag 3901 cctgagcccc cggcgcgggg gctgctacac tacaggacac ccagcatcgg ctttgactgc 3961 agactgttca cccacacgag ccctgtgctt ttggtgtaaa taatgtacaa tttgtggatg 4021 tcattgaatc tagaggactt tccccttttt atatttgtat taactttaac ttatt //