LOCUS AK294501 2204 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50489 complete cds, highly similar to
PEX5-related protein.
ACCESSION AK294501
VERSION AK294501.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2204)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2204
/clone="BRAMY3013614"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489125"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 330..2033
/codon_start=1
/note="highly similar to PEX5-related protein"
/protein_id="BAH11791.1"
/transl_table=1
/translation="MYQGHMQLVNEQQESRPLLSPSIDDFLCETKSEAIARPVTSNTA
VLTTGLDLLDLSEPVSQTQTKAKKSEPSSKTSSLKKKADGSDLISTDAEQRGQPLRVP
ETSSLDLDIQTQLEKWDDVKFHGDRNTKGHPMAERKSSSSRTGSKELLWSSEHRSQPE
LSGGKSALNSESASELELVAPTQARLTKEHRWGSALLSRNHSLEEEFERAKAAVESDT
EFWDKMQAEWEEMARRNWISENQEAQNQVTISASEKGYYFPTENPFKDWPGAFEEGLK
RLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNN
LKALMALAVSYTNTGHQQDACDALKNWIKQNPKYKYLVKSKKGSPGLTRRMSKSPVDS
SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYS
LWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLT
ALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLD
P"
BASE COUNT 646 a 558 c 552 g 448 t
ORIGIN
1 gaaagagttc ggcgaagaag gagtgagttc tagagacgcc ccgcgagcag gacccgcgcc
61 tgcaggagag cctggccgac ccggctcctc gccttctctg cgcgctctcc cgcgtccgct
121 ttcagcaccc cgagcgaaga acagttcccg gcagcccgca gcgctgccga gtggccgccg
181 gccggccgag tacccggagc tccagggggc tcaggagcac cctctgagaa cccgctgtgc
241 acccaccttt tcccctcttt tggtgggcga gtaagcacgg gggaaaagca tccggtggcc
301 tcagggagcc ctgaagaaac cgaagcagaa tgtaccaggg acacatgcag ctggtgaatg
361 agcaacaaga aagcagaccc ctcctgagtc cctccatcga tgactttctc tgtgaaacca
421 aatcggaagc aatagcaagg ccagtaacat ccaatacagc tgtattgacc actggcttag
481 atctcctcga cctgagtgaa ccagtctctc aaacccaaac caaagccaag aagtcagagc
541 cctcatcaaa aacctcatcc ctcaagaaaa aggccgatgg atctgacctc atcagcacgg
601 atgctgagca gagaggccag cctctcagag tcccggagac ttcatcctta gatctagaca
661 ttcaaacaca actggaaaaa tgggacgatg ttaagtttca tggagatcga aataccaagg
721 gacatccaat ggcagagaga aaatcatcct catctagaac tggatcaaaa gagctcttat
781 ggtcctcaga acacagatct caaccagaac tgagtggtgg aaaaagcgcc ctcaactctg
841 agtcggcttc agaattggaa ttagtggctc cgactcaggc tcgactgacc aaagaacatc
901 gctggggaag cgcattactt tctagaaacc actccttaga agaagagttt gaaagggcaa
961 aagcagcagt ggagtcagat acagagtttt gggataagat gcaagcagaa tgggaagaaa
1021 tggctcggag gaactggata tctgagaacc aagaagccca gaaccaagta accatctcgg
1081 ctagtgagaa gggatattac tttcccactg aaaacccctt caaggactgg cctggagcat
1141 ttgaagaagg cttaaaaagg ctgaaggaag gggatctgcc agtcaccatc ctgttcatgg
1201 aagcagcaat tcttcaggac cctggagatg cagaggcatg gcagttcctc gggataaccc
1261 aggcggagaa tgaaaatgaa caagcagcta ttgtcgccct ccagaggtgc ttagaattac
1321 agcccaacaa cttaaaagct ttgatggcct tggctgtgag ttatactaac actggccatc
1381 agcaggatgc ctgtgacgct ctgaagaatt ggattaagca aaatccaaag tacaaatacc
1441 ttgtgaaaag caagaaggga tctccaggcc tcacccggcg gatgtctaag tccccagttg
1501 atagctctgt tctggaaggg gtgaaggaat tatatctgga agctgcccac caaaatggag
1561 atatgatcga cccagacctg cagacaggtc taggggttct gttccacctg agtggagaat
1621 ttaatagagc aatagatgca tttaacgctg ccttaactgt tcggccagag gactattcac
1681 tatggaaccg cctcggggcg accttggcga acggagaccg cagcgaggaa gccgtggagg
1741 cctatacgcg agcactggag attcagccag gattcatccg gtccagatac aacctaggaa
1801 taagctgcat caacctgggc gcctacagag aagcggtcag caattttctc actgccctca
1861 gtttgcaaag aaagagcagg aatcagcagc aagttcctca tcctgcaatc tctgggaata
1921 tctgggctgc cctcagaatt gcgctctctc tgatggacca accagaactc ttccaggcgg
1981 ctaatcttgg tgacctggat gtcctcttaa gagctttcaa cttggatcct tgaagaaaga
2041 ataataccag tactaataat ccctgatctg tgtgattgta ctgaaaaatc aaaaactatt
2101 ttattatgaa tttcaaaagg ataaatcaaa tattcaaaag gccatggtca tatagcccaa
2161 ggaaattaat tcctgtggac aatgcccagt ctctgttcag atcc
//