LOCUS AK294493 3885 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56068 complete cds, highly similar to DNA
damage-binding protein 1.
ACCESSION AK294493
VERSION AK294493.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3885)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3885
/clone="BRAMY3013102"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489117"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 374..3652
/codon_start=1
/note="highly similar to DNA damage-binding protein 1"
/protein_id="BAH11787.1"
/transl_table=1
/translation="MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVV
TAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIIT
RAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLE
ELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASM
VIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPHGSRYLLGDM
EGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLV
KLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRN
GIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG
FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQV
VVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA
RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS
DRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPL
NSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRI
EVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT
FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG
KLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL
KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF
NLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLF
GTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFHLEILSHRAEDRTSHR
FHRR"
BASE COUNT 933 a 1011 c 1042 g 899 t
ORIGIN
1 atctgtcaga gggagccagg aatgagctgc atcggggggg ccttggcctt agggcggcct
61 gtgccagagg gaccacctac ctttatccgg cgcacaccag cttccccgtg gatccctgcg
121 gatagatgtg gtcactgctg acccactcaa ggcctgggga tttgctcatc gtttttatca
181 aggactcaca cagtgctgga ctcacacaag ccagaagagg gtctagggac cagtgctatc
241 cctggtttca gtggcctgaa aggatggaaa aggaaaggaa gtcaagtgag gcctccagga
301 ctctgcttga tcaacaccac acaaccactg gagtgtcgcg ctcgagtccc gacgggccgc
361 tccaagcctc gacatgtcgt acaactacgt ggtaacggcc cagaagccca ccgccgtgaa
421 cggctgcgtg accggacact ttacttcggc cgaagactta aacctgttga ttgccaaaaa
481 cacgagatta gagatctatg tggtcaccgc cgaggggctt cggcccgtca aagaggtggg
541 catgtatggg aagattgcgg tcatggagct tttcaggccc aagggggaga gcaaggacct
601 gctgtttatc ttgacagcga agtacaatgc ctgcatcctg gagtataaac agagtggcga
661 gagcattgac atcattacgc gagcccatgg caatgtccag gaccgcattg gccgcccctc
721 agagaccggc attattggca tcattgaccc tgagtgccgg atgattggcc tgcgtctcta
781 tgatggcctt ttcaaggtta ttccactaga tcgcgataat aaagaactca aggccttcaa
841 catccgcctg gaggagctgc atgtcattga tgtcaagttc ctatatggtt gccaagcacc
901 tactatttgc tttgtctacc aggaccctca ggggcggcac gtaaaaacct atgaggtgtc
961 tctccgagaa aaggaattca ataagggccc ttggaaacag gaaaatgtcg aagctgaagc
1021 ttccatggtg atcgcagtcc cagagccctt tgggggggcc atcatcattg gacaggagtc
1081 aatcacctat cacaatggtg acaaatacct ggctattgcc cctcctatca tcaagcaaag
1141 cacgattgtg tgccacaatc gagtggaccc tcatggctca agatacctgc tgggagacat
1201 ggaaggccgg ctcttcatgc tgcttttgga gaaggaggaa cagatggatg gcaccgtcac
1261 tctcaaggat ctccgtgtag aactccttgg agagacctct attgctgagt gcttgacata
1321 ccttgataat ggtgttgtgt ttgtcgggtc tcgcctgggt gactcccagc ttgtgaagct
1381 caacgttgac agtaatgaac aaggctccta tgtagtggcc atggaaacct ttaccaactt
1441 aggacccatt gtcgatatgt gcgtggtgga cctggagagg caggggcagg ggcagctggt
1501 cacttgctct ggggctttca aggaaggttc tttgcggatc atccggaatg gaattggaat
1561 ccacgagcat gccagcattg acttaccagg catcaaagga ttatggccac tgcggtctga
1621 ccctaatcgt gagactgatg acactttggt gctctctttt gtgggccaga caagagttct
1681 catgttaaat ggagaggagg tagaagaaac cgaactgatg ggtttcgtgg atgatcagca
1741 gactttcttc tgtggcaacg tggctcatca gcagcttatc cagatcactt cagcatcggt
1801 gaggttggtc tctcaagaac ccaaagctct ggtcagtgaa tggaaggagc ctcaggccaa
1861 gaacatcagt gtggcctcct gcaatagcag ccaggtggtg gtggctgtag gcagggccct
1921 ctactatctg cagatccatc ctcaggagct ccggcagatc agccacacag agatggaaca
1981 tgaagtggct tgcttggaca tcaccccatt aggagacagc aatggactgt cccctctttg
2041 tgccattggc ctctggacgg acatctcggc tcgtatcttg aagttgccct cttttgaact
2101 actgcacaag gagatgctgg gtggagagat cattcctcgc tccatcctga tgaccacctt
2161 tgagagtagc cattacctcc tttgtgcctt gggagatgga gcgcttttct actttgggct
2221 caacattgag acaggtctgt tgagcgaccg taagaaggtg actttgggca cccagcccac
2281 cgtattgagg acttttcgtt ctctttctac caccaacgtc tttgcttgtt ctgaccgccc
2341 cactgtcatc tatagcagca accacaaatt ggtcttctca aatgtcaacc tcaaggaagt
2401 gaactacatg tgtcccctca attcagatgg ctatcctgac agcctggcgc tggccaacaa
2461 tagcaccctc accattggca ccatcgatga gatccagaag ctgcacattc gcacagttcc
2521 cctctatgag tctccaagga agatctgcta ccaggaagtg tcccagtgtt tcggggtcct
2581 ctccagccgc attgaagtcc aagacacgag tgggggcacg acagccttga ggcccagcgc
2641 tagcacccag gctctgtcca gcagtgtaag ctccagcaag ctgttctcca gcagcactgc
2701 tcctcatgag acctcctttg gagaagaggt ggaggtgcac aacctactta tcattgacca
2761 acacaccttt gaagtgcttc atgcccacca gtttctgcag aatgaatatg ccctcagtct
2821 ggtttcctgc aagctgggca aagaccccaa cacttacttc attgtgggca cagcaatggt
2881 gtatcctgaa gaggcagagc ccaagcaggg tcgcattgtg gtctttcagt attcggatgg
2941 aaaactacag actgtggctg aaaaggaagt gaaaggggcc gtgtactcta tggtggaatt
3001 taacgggaag ctgttagcca gcatcaatag cacggtgcgg ctctatgagt ggacaacaga
3061 gaaggagctg cgcactgagt gcaaccacta caacaacatc atggccctct acctgaagac
3121 caagggcgac ttcatcctgg tgggcgacct tatgcgctca gtgctgctgc ttgcctacaa
3181 gcccatggaa ggaaactttg aagagattgc tcgagacttt aatcccaact ggatgagtgc
3241 tgtggaaatc ttggatgatg acaattttct gggggctgaa aatgccttta acttgtttgt
3301 gtgtcaaaag gatagcgctg ccaccactga cgaggagcgg cagcacctcc aggaggttgg
3361 tcttttccac ctgggcgagt ttgtcaatgt cttttgccac ggctctctgg taatgcagaa
3421 tctgggtgag acttccaccc ccacacaagg ctcggtgctc ttcggcacgg tcaacggcat
3481 gatagggctg gtgacctcac tgtcagagag ctggtacaac ctcctgctgg acatgcagaa
3541 tcgactcaat aaagtcatca aaagtgtggg gaagatcgag cactccttcc acctggagat
3601 cctttcacac cgagcggaag acagaaccag ccacaggttt catcgacggt gacttgatta
3661 agagtttcct ggatattagc cgccccaaga tgcaggaggt ggtggcaaac ctacagtatg
3721 acgatggcag cggtatgaag cgagaggcca ctgcagacga cctcatcaag gttgtggagg
3781 agctaactcg gatccattag ccaagggcag ggggcccctt tgctgaccct ccccaaaggc
3841 tttgccctgc tgccctcccc ctcctctcca ccatcgtctt cttgg
//