LOCUS AK294478 3224 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56477 complete cds, highly similar to CG1
protein.
ACCESSION AK294478
VERSION AK294478.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3224)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3224
/clone="BRAMY3011618"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489102"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 176..3172
/codon_start=1
/note="highly similar to CG1 protein"
/protein_id="BAG57704.1"
/transl_table=1
/translation="MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGTVKRRQEEDHF
QFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPAAMGVAGQ
SLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELLEELTK
IQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFASSC
SQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQW
HHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPP
FSPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQ
QPQFGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTP
QCSLIRSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGA
TEPFTFGNTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTAT
ATLQLQQQQQQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQQEEQRSGLMA
MTPERQNAYISQQMSPFEAVQEQVTSKCSRIKASPPSSKHLMPPRTGLLQNNLSPGMI
PLTRHQSCEGMGVISPTLGKRQGIFTSSPQCPILSHSGQTPLGRLDSVCQHMQSPKAT
PPEVPLPGFCPSSLGTQSLSPHQLRRPSVPRMPTAFNNAAWVTAAAAVTTAVSGKTPL
SQVDNSVQQHSPSGQACLQRPSDWEAQVPAAMGTQVPLANNPSFSLLGSQSLRQSPVQ
GPVPVANTTKFLQQGMASFSPLSPIQGIEPPSYVAAAATAAAASAVAASQFPGPFDRT
DIPPELPPADFLRQPQPPLNDLISSPDCNEVDFIEALLKGSCVSPDEDWVCNLRLIDD
ILEQHAAAQNATAQNSGQVTQDAGAL"
BASE COUNT 758 a 1068 c 763 g 635 t
ORIGIN
1 gatctgcaac agggctgggt tccttggcgg ccgcctgagt ccaggctgcc cgcgccggcg
61 gccgcccgcc cctcggacac tgcccccgcc gccgccggag ctctgcagca cgccctgtgt
121 ctaggtcgtt tgggaaacgc cttggagagt caagaataaa tttgcaggtc aaacaatgga
181 tgactggaaa agtcggcttg taatcaagag catgcttccc catttcgcca tggtgggaaa
241 tcgtcaggag cccagaaagc tccaggaatc gggaactgtt aagaggagac aagaagaaga
301 ccacttccag tttccagaca tggctgatgg gggctaccct aataaaatta agaggccttg
361 ccttgaagat gtcacccttg caatgggccc aggtgctcat cctagtactg cttgtgcaga
421 actgcaggtc cctccattga caataaatcc tagccctgcg gctatgggag tggctggcca
481 gtcattactg ctggagaata accctatgaa tggcaacatc atgggctcac catttgtagt
541 accacagact acagaagtgg gactgaaagg gcccactgtt ccttactatg agaaaatcaa
601 cagcgtgccg gctgtagacc aggagcttca agagctgcta gaggagctca ccaaaattca
661 agacccttct ccaaatgagc tagatcttga gaagatactg gggacgaagc cagaagagcc
721 actggtttta gatcatcccc aggcaaccct aagcacaact cccaagcctt cggttcagat
781 gtcacacttg gagagcctgg cttccagcaa ggagtttgct tctagttgca gccaagttac
841 tggcatgtca cttcagatcc catcctcctc cacagggatc agctattcga ttccttccac
901 cagtaagcag atagtgtcac cgagttcttc aatggcacag tccaagagcc aggtccaggc
961 catgctccct gtcgctctgc cccccttacc agtgcctcag tggcatcacg cccaccagct
1021 gaaggcgttg gcagccagca agcaggggtc tgctacaaag cagcaagggc ccacccccag
1081 ttggtctggt ctgcctcctc caggactctc tccaccttac cgcccagtgc catcaccaca
1141 cccaccaccg ctgccactgc caccaccacc acccccattc agcccccaga gcctcatggt
1201 gtcctgcatg tcgtccaata ccttgtcggg tagcactctc cgaggctctc ccaatgcctt
1261 actgtcaagc atgacgtcca gcagcaatgc tgccctgggg cccgccatgc cctatgctcc
1321 tgagaagctc cccagccctg ctctcactca acagccgcag ttcggccctc agagctccat
1381 tcttgccaac ctcatgtcct ctaccatcaa aacccctcaa ggacacctga tgtctgctct
1441 gcctgccagc aaccctgggc cgtccccacc ctatcgccca gagaagctct ctagcccagg
1501 cttgccacag cagtccttca ccccacagtg ttccctgatc cgaagcctca ctcccaccag
1561 taatcttcta agccagcaac agcagcagca gcagcagcag cagcaagcaa atgtgatctt
1621 taagcccata agcagcaact catccaaaac cctgagcatg atcatgcagc aggggatggc
1681 aagctccagc ccaggagcca cggagccatt tacttttggc aacaccaagc ccttgtccca
1741 ttttgtttct gagccgggtc cccagaagat gccctccatg cctaccacct ctaggcagcc
1801 ttccctgctc cactacctgc agcagccgac accaacgcag gcctcctcag ccactgcctc
1861 ctccacggcc actgccacct tgcagctgca gcagcagcag cagcaacagc agcagcagcc
1921 tgaccattct tcattccttc tgcagcagat gatgcagcaa ccccagcgtt ttcagcgatc
1981 agtggcctca gattccatgc ctgctctgcc cagacagcaa gaggaacaga gatcaggtct
2041 tatggcaatg acccctgaac ggcagaatgc atatatctcc caacagatga gtccatttga
2101 agccgtccaa gaacaagtca cctccaagtg tagccggatc aaggcaagcc ccccatctag
2161 caagcacttg atgccaccca gaactgggct tcttcagaac aatctgagtc caggaatgat
2221 cccactcacc aggcaccaga gctgcgaggg catgggagtg atctcaccaa ctctggggaa
2281 gcggcaagga attttcacct ccagccccca gtgtcccatc ctctcacact caggccagac
2341 tcccctgggc agacttgact ctgtctgcca gcatatgcag agccccaagg ccaccccacc
2401 agaagtgccc ctgcctgggt tctgtcccag ctccctgggc acccagtcct tgagtcccca
2461 ccagctcaga cggcctagtg tgccaagaat gcccactgcg ttcaacaatg ctgcatgggt
2521 cacagcggca gcagctgtga ccacagcagt ttcggggaaa acacccctca gccaagtgga
2581 taatagcgtt cagcagcact caccttctgg ccaggcctgc cttcagaggc catctgattg
2641 ggaggcacaa gtgcccgctg cgatgggaac acaagtgccc ctggccaaca accccagctt
2701 cagcctgctg ggcagccaga gcctcaggca gagcccggta cagggcccgg tgcctgtagc
2761 aaacaccacc aagttcctcc agcagggtat ggccagcttt agtcccctga gccccataca
2821 gggcatcgag ccaccaagct atgtggctgc tgctgccacc gctgctgctg cttctgccgt
2881 tgctgccagc cagttcccag gtccgttcga cagaacggat attccccctg agctgccacc
2941 tgccgacttt ttgcgccagc cccaaccccc actaaatgat ctgatttcgt cacctgactg
3001 caatgaggta gatttcattg aagctctctt gaaaggctcc tgtgtgagcc cagatgaaga
3061 ctgggtgtgc aacttgaggc tgatcgacga cattttggaa cagcatgctg ctgctcaaaa
3121 tgccacagcc cagaattctg ggcaagtcac ccaggatgct ggggcacttt aaatctgagc
3181 aggatgccca tagaaacccc catggtgaca tcactctagg aagt
//