LOCUS AK294476 5103 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ61692 complete cds, highly similar to Homo sapiens SH3 domain protein D19 (SH3D19), mRNA. ACCESSION AK294476 VERSION AK294476.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5103) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..5103 /clone="BRAMY3011475" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000489100" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 1000..3303 /codon_start=1 /note="highly similar to Homo sapiens SH3 domain protein D19 (SH3D19), mRNA" /protein_id="BAH11782.1" /transl_table=1 /translation="MNIMNTEQSQNSIVSRIKVFEGQTNIETSGLPKKPEITPRSLPP KPTVSSGKPSVAPKPAANRASGEWDSGTENRLKVTSKEGLTPYPPLQEAGSIPVTKPE LPKKPNPGLIRSVNPEIPGRGPLAESSDSGKKVPTPAPRPLLLKKSVSSENPTYPSAP LKPVTVPPRLAGASQAKAYKSLGEGPPANPPVPVLQSKPLVDIDLISFDDDVLPTPSG NLAEESVGSEMVLDPFQLPAKTEPIKERAVQPAPTRKPTVIRIPAKPGKCLHEDPQSP PPLPAEKPIGNTFSTVSGKLSNVERTRNLESNHPGQTGGFVRVPPRLPPRPVNGKTIP TQQPPTKVPPERPPPPKLSATRRSNKKLPFNRSSSDMDLQKKQSNLATGLSKAKSQVF KNQDPVLPPRPKPGHPLYSKYMRGDVLVMLKQTENNYLECQKGEDTGRVHLSQMKIIT PLDEHLRSRPNDPSHAQKPVDSGAPHAVVLHDFPAEQVDDLNLTSGEIVYLLEKIDTD WYRGNCRNQIGIFPANYVKVIIDIPEGGNGKRECVSSHCVKGSRCVARFEYIGEQKDE LSFSEGEIIILKEYVNEEWARGEVRGRTGIFPLNFVEPVEDYPTSGANVLSTKVPLKT KKEDSGSNSQVNSLPAEWCEALHSFTAETSDDLSFKRGDRIQILERLDSDWCRGRLQD REGIFPAVFVRPCPAEAKSMLAIVPKGRKAKALYDFRGENEDELSFKAGDIITELESV DDDWMSGELMGKSGIFPKNYIQFLQIS" BASE COUNT 1589 a 1126 c 1029 g 1359 t ORIGIN 1 agccatttgc ttcctgagtg gccacattcc agctgtgcag actggtcata gcacatctgc 61 caatcagaac aggccctgga gggaagccct tggatactga gtcttgttta catgcatcgt 121 gactctgttt ctcccttcct cttgtgtgtt gtaccactag gaagattagt ggggaaattt 181 gctattacat gcctaagtaa actatgtaac taggatcaca gccacaggaa atgatgttct 241 ggacagagtt ttagctcggc tttagccaca gatcgcaacg aacgaaataa accagaacat 301 cgttcttcaa gccaaggacc cttgtcatcc attagagcgg taatcaagag atcttctcgg 361 acttctattc agagtgaact tcatcgagat agaaggcgcc cagagatcac cattgtggca 421 gctgagccac tgaggccagc ctcgtggttt ccaggaaccc cacccccagg actgggattt 481 cctacatcat ctgcagcagg ctcttggagg cctaatgagc tggttcctgc tgagctccca 541 ccatcttatg aacaagttat aaaagaaatc aaccaagttc aagttaatac tacaaataat 601 aataatgctg ctgctactcc aaggcacact attacttctg caactcagac tgacttttca 661 gaagaaatag acaacgatct gcctcaaaca ctacaggcac ctctcaagcc tcttcagcct 721 ttctcagcag tctcgtctgg caatcttcca acaaatgtgg cacctttaat cgtctttgat 781 atttctgaag aaccgaattg tccagaaaac cccagtgcta caagatgtcc agtgccaaaa 841 ccaagatcaa aaagcaacct cagaccaata cccagagatt ctcacattaa agagcaaagt 901 caacagaaaa tcagcccagc agccgtagga gaggagtcat ccccaggccg gccccagtct 961 ctgctggaca acgctagcac ctcagacagt caggcagtga tgaacattat gaacacagaa 1021 caaagccaaa atagtattgt ttccagaatt aaagtgtttg agggtcagac aaacatagaa 1081 acctcaggac tgcccaagaa accagaaatt actccacgtt cacttcctcc aaagcctact 1141 gtttcctcag ggaaaccttc tgtagctccc aaaccagctg ctaacagagc ttctggagag 1201 tgggactctg ggactgagaa cagactcaag gtgacctcca aggaaggact caccccatac 1261 cctcccctgc aagaagcggg aagcatccca gtaaccaaac ctgaattgcc aaagaaacca 1321 aaccctggcc ttatacgaag tgttaatcct gagattccgg gaagagggcc cctggctgag 1381 agctctgata gtgggaagaa agtgccaact cctgccccgc ggcctttgct gctgaagaaa 1441 tctgtttcct cagaaaaccc cacctaccct tcagctccac tgaaacctgt cactgttcct 1501 ccccgactcg caggggcatc acaagccaaa gcatacaagt cactgggaga agggccccca 1561 gccaaccccc cagttccagt tctgcagagc aagcccttgg tggacatcga tctcatcagc 1621 tttgatgatg atgttttgcc caccccatcg gggaacctgg ctgaagaatc tgttggttca 1681 gagatggttc tagatccctt tcagctccct gcaaaaacag aaccaataaa agaacgagca 1741 gttcaaccag cacccaccag gaagcccact gtaattcgaa ttccagccaa accaggaaaa 1801 tgtttacatg aggatccaca aagtccacct cctctccctg ctgaaaaacc tattggaaac 1861 actttcagta cagtatctgg aaagctcagt aatgttgaga gaactagaaa cttggaatcc 1921 aaccacccag gtcaaacagg aggttttgtg cgagtacccc caaggttgcc accgagacct 1981 gtgaatggaa aaaccattcc aactcaacag cctccaacca aggtgccccc tgagagacca 2041 cctcccccaa agctttctgc aaccagaaga tctaataaga aactgccttt taatcgatcc 2101 tcttctgaca tggatcttca gaaaaaacaa agtaacttgg caactggact ctcaaaagcc 2161 aagagtcaag tttttaaaaa tcaagatccg gtgctacccc ctcgtcccaa accaggacac 2221 cctctctaca gtaaatacat gcgtggggat gtacttgtga tgctgaagca gacggaaaat 2281 aattacttgg agtgccaaaa gggagaagac actggcagag ttcacctgtc tcaaatgaag 2341 attatcactc cacttgatga acatcttaga agcagaccaa acgatccaag ccacgctcag 2401 aagcctgttg acagtggtgc tcctcatgct gtcgttcttc atgatttccc agcagagcaa 2461 gttgatgatt tgaacctcac ttctggagaa attgtttatc ttctggagaa gatagataca 2521 gattggtaca gagggaactg tagaaaccag attggcatat ttcctgccaa ctatgtcaaa 2581 gtgattattg atatcccaga aggaggaaat gggaaaagag aatgtgtttc atctcattgt 2641 gttaaaggct caagatgtgt tgctcggttt gaatatattg gagagcagaa ggatgagttg 2701 agtttctcag agggagaaat tattattctt aaagagtatg tgaatgagga atgggccaga 2761 ggagaagttc gaggcagaac tgggattttc cccctgaact ttgtggagcc tgttgaggat 2821 tatcccacct ctggtgcaaa tgttttaagc acaaaggtac cactgaaaac caaaaaagaa 2881 gattctggct caaactctca ggttaacagt cttccggcag aatggtgtga agctcttcac 2941 agttttacag cagagaccag tgatgactta tcattcaaga ggggagaccg gatccagatt 3001 ctggaacgtc tggattctga ctggtgcagg ggcagactgc aggacaggga ggggatcttc 3061 ccagcagtgt ttgtgaggcc ctgcccagct gaggcaaaaa gtatgttggc catagtaccg 3121 aaggggagga aggccaaagc cttatatgat ttccgagggg agaatgaaga tgaactttcc 3181 ttcaaggctg gagatataat aacagagctg gaatctgtag atgatgactg gatgagtgga 3241 gaacttatgg gaaaatctgg aatatttccc aaaaactaca tacagtttct acagatcagc 3301 tagaggagaa gcttgtctgt gttccttggc acaagaactc acttgaacta tcaccttgac 3361 tatcagatat gtttttgcac tatttttttt aactgaaaaa gaaatatcta agctgtacat 3421 ggtacactag aattttctga aagcagaaaa cgttcagatt ttgtagttaa ttttcattac 3481 aatagaaaca tgcacatgga aacccatgag ctaggattct accgaggaaa acatctagtg 3541 ggattagcaa ggtgaaggga aagcatctgg tggcatggca gcatggggag gctcacacac 3601 agaagttgca cgtggacatc tgttttaatc agcacaagtg aattaaccat gcttcttcat 3661 ttttttactt tagttaaaaa agaggacatt taatattcta catgctgtaa ctatcaggac 3721 atggttagca atctcaattt catttttgat attcaaatta attcttacag cttgagcata 3781 tcagccttat taccagagca aatccttcct tcagatggga tagtttactg actagttgga 3841 gcatttgtaa gcacatggtg aaatcagccc ctgcccacca aaataatctt tatgttacca 3901 agtgattccc atttgtctaa ggatttgaag ggggtctaaa ttggatgtat cttagtctaa 3961 agaaccaaaa ccatccctga aatgccttgc taatacaact aatccttcca tatatgtgcc 4021 atacttattt ttttcctcag tgtatacttt atgttaacag ggttattaca aagcacattt 4081 tctgaatctg caatcattcc tttgacaatt actggaccca aaggaaaatt cattttcttt 4141 gcattattcc agtaatatat aaaaactgtg tcttgttata gtagtacatt atgaatcaca 4201 tataaaatct tacaatacag aacaactgtt aagatggaaa acagtgccaa acctccacag 4261 ctcatttctt tgtaatataa tcagaatgaa aaataattta agaggacaga agactggtac 4321 ttttttgttt tattttttct ctagcttatc cctgcacaat tattagagtg aatgaaaaac 4381 cactttcctg ctttccattg ttataaattc taagcttaag ataaaagtgg ttctttacat 4441 gactgaatca attacaattt atgggctaga gccaaatagg ttgaagacaa tcatccaaac 4501 agatcaatgg aatagaattt cattggaaat gtaaaacact ttcccaacaa tggtcatgac 4561 tttcttctgt ttttgagaag agtttcatat gctggaccac attttagctt ttattgtttt 4621 ttttttccca ttgtccaaaa agttaagcaa caagtggcca cacttttacg tgactacaac 4681 ctggagttct gcaaagaagg taatatttac ttggtctttg actaaagtta tctccccatt 4741 ctatggttac attttatttt ggactatggg gacttctaat acgttttggt aaagaagaga 4801 gtataaagaa aattcttgtc aaatttcact caaaagtaat ttcatgagaa atcaatgatt 4861 taaagcatta tccaaattaa attatcattt gcagcaaact gtacaacagc aggaaggata 4921 tggaatggaa catgaggtat atatctttgc ctttataatt ttaacatctt atattgaaga 4981 ttctgaaaac ctatctttat tagaggaaaa tctcaatctt cagttttggc cttctgtcac 5041 cagaatgata agtgcaatag ttgtaaatct acttgacact gtaataaact gaactgaact 5101 ttc //